esv2830435
- Organism: Homo sapiens
- Study:estd208 (Helbig et al. 2013)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:117,058
- Publication(s):Helbig et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 401 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 401 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 76 SVs from 18 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2830435 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 52,725,614 | 52,842,671 |
| esv2830435 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000014.8 | Chr14 | 53,192,332 | 53,309,389 |
| esv2830435 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000014.7 | Chr14 | 52,262,082 | 52,379,139 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|---|
| essv7100011 | duplication | NL9 | Oligo aCGH | Probe signal intensity | Seizure | Uncertain significance | Submitter |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7100011 | Remapped | Perfect | NC_000014.9:g.(?_5 2725614)_(52842671 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 52,725,614 | 52,842,671 |
| essv7100011 | Remapped | Perfect | NC_000014.8:g.(?_5 3192332)_(53309389 _?)dup | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 53,192,332 | 53,309,389 |
| essv7100011 | Submitted genomic | NC_000014.7:g.(?_5 2262082)_(52379139 _?)dup | NCBI36 (hg18) | NC_000014.7 | Chr14 | 52,262,082 | 52,379,139 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | Sample ID | HGVS | Type | Subject Phenotype | Clinical Interpretation | Source of Interpretation | Gender |
|---|---|---|---|---|---|---|---|
| essv7100011 | NL9 | NCBI36: NC_000014.7:g.(?_52262082)_(52379139_?)dup | duplication | Seizure | Uncertain significance | Submitter | Male |