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dbVar

Database of genomic structural variation

esv1775875

Organism: Homo sapiens

Study:estd22 (Levy et al. 2007)
Variant Type:insertion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Levy et al. 2007

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 107 SVs from 37 studies. See in: genome view

Remapped(Score: Perfect):56,375,274-56,375,274

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv1775875	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	56,375,274	56,375,274
esv1775875	Remapped	Perfect	GRCh38.p12	ALT_REF_LOCI_1	Second Pass	NW_003871073.1	Chr11\|NW_0 03871073.1	186,024	186,024
esv1775875	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	56,142,750	56,142,750
esv1775875	Remapped	Perfect	GRCh37.p13	PATCHES	Second Pass	NW_003871073.1	Chr11\|NW_0 03871073.1	186,024	186,024
esv1775875	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000011.8	Chr11	55,899,326	55,899,326

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
essv3886650	insertion	HuRef	Sequencing	Sequence alignment	Homozygous	780,358

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv3886650	Remapped	Perfect	NW_003871073.1:g.1 86024_186025insT	GRCh38.p12	Second Pass	NW_003871073.1	Chr11\|NW_0 03871073.1	186,024	186,024
essv3886650	Remapped	Perfect	NC_000011.10:g.563 75274_56375275insT	GRCh38.p12	First Pass	NC_000011.10	Chr11	56,375,274	56,375,274
essv3886650	Remapped	Perfect	NW_003871073.1:g.1 86024_186025insT	GRCh37.p13	Second Pass	NW_003871073.1	Chr11\|NW_0 03871073.1	186,024	186,024
essv3886650	Remapped	Perfect	NC_000011.9:g.5614 2750_56142751insT	GRCh37.p13	First Pass	NC_000011.9	Chr11	56,142,750	56,142,750
essv3886650	Submitted genomic		NC_000011.8:g.5589 9326_55899327insT	NCBI36 (hg18)		NC_000011.8	Chr11	55,899,326	55,899,326

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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