esv2761462
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:175,824
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 693 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 693 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 188 SVs from 20 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761462 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 114,650,365 | 114,826,188 |
| esv2761462 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 115,662,594 | 115,838,417 |
| esv2761462 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000008.9 | Chr8 | 115,731,770 | 115,907,593 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv6993397 | copy number loss | SW_0015 | SNP array | SNP genotyping analysis | 33 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6993397 | Remapped | Perfect | NC_000008.11:g.(?_ 114650365)_(114826 188_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 114,650,365 | 114,826,188 |
| essv6993397 | Remapped | Perfect | NC_000008.10:g.(?_ 115662594)_(115838 417_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 115,662,594 | 115,838,417 |
| essv6993397 | Submitted genomic | NC_000008.9:g.(?_1 15731770)_(1159075 93_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 115,731,770 | 115,907,593 |