esv2761661
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:5,647
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 130 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 130 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 29 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761661 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 34,492,385 | 34,498,031 |
| esv2761661 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 34,513,932 | 34,519,578 |
| esv2761661 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 34,470,508 | 34,476,154 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv6995843 | copy number loss | SW_0164 | SNP array | SNP genotyping analysis | 22 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6995843 | Remapped | Perfect | NC_000011.10:g.(?_ 34492385)_(3449803 1_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 34,492,385 | 34,498,031 |
| essv6995843 | Remapped | Perfect | NC_000011.9:g.(?_3 4513932)_(34519578 _?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 34,513,932 | 34,519,578 |
| essv6995843 | Submitted genomic | NC_000011.8:g.(?_3 4470508)_(34476154 _?)del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 34,470,508 | 34,476,154 |