esv2761706
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:110,691
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 472 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 472 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 136 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761706 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 104,652,607 | 104,763,297 |
| esv2761706 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 104,523,335 | 104,634,024 |
| esv2761706 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 104,028,545 | 104,139,234 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv6996271 | copy number gain | SW_0120 | SNP array | SNP genotyping analysis | 37 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6996271 | Remapped | Good | NC_000011.10:g.(?_ 104652607)_(104763 297_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 104,652,607 | 104,763,297 |
| essv6996271 | Remapped | Perfect | NC_000011.9:g.(?_1 04523335)_(1046340 24_?)dup | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 104,523,335 | 104,634,024 |
| essv6996271 | Submitted genomic | NC_000011.8:g.(?_1 04028545)_(1041392 34_?)dup | NCBI36 (hg18) | NC_000011.8 | Chr11 | 104,028,545 | 104,139,234 |