esv2761716
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:21,883
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 204 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 204 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 102 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2761716 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 123,964,222 | 123,986,104 |
| esv2761716 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 123,834,929 | 123,856,811 |
| esv2761716 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 123,340,139 | 123,362,021 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv6996314 | copy number loss | SW_1323 | SNP array | SNP genotyping analysis | 29 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv6996314 | Remapped | Perfect | NC_000011.10:g.(?_ 123964222)_(123986 104_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 123,964,222 | 123,986,104 |
| essv6996314 | Remapped | Perfect | NC_000011.9:g.(?_1 23834929)_(1238568 11_?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 123,834,929 | 123,856,811 |
| essv6996314 | Submitted genomic | NC_000011.8:g.(?_1 23340139)_(1233620 21_?)del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 123,340,139 | 123,362,021 |