esv2763018
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:175,687
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 589 SVs from 59 studies. See in: genome view
Overlapping variant regions from other studies: 589 SVs from 59 studies. See in: genome view
Overlapping variant regions from other studies: 225 SVs from 19 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2763018 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 43,512,797 | 43,688,483 |
| esv2763018 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000013.10 | Chr13 | 44,086,933 | 44,262,619 |
| esv2763018 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000013.9 | Chr13 | 42,984,933 | 43,160,619 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7021405 | copy number loss | RW_0152 | SNP array | SNP genotyping analysis | 60 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv7021405 | Remapped | Perfect | NC_000013.11:g.(?_ 43512797)_(4368848 3_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 43,512,797 | 43,688,483 |
| essv7021405 | Remapped | Perfect | NC_000013.10:g.(?_ 44086933)_(4426261 9_?)del | GRCh37.p13 | First Pass | NC_000013.10 | Chr13 | 44,086,933 | 44,262,619 |
| essv7021405 | Submitted genomic | NC_000013.9:g.(?_4 2984933)_(43160619 _?)del | NCBI36 (hg18) | NC_000013.9 | Chr13 | 42,984,933 | 43,160,619 |