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dbVar

Database of genomic structural variation

esv3689323

Organism: Homo sapiens

Study:estd220 (Pettigrew et al. 2015)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:98,887

Publication(s):Pettigrew et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 309 SVs from 46 studies. See in: genome view

Remapped(Score: Perfect):91,946,103-92,044,989

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
esv3689323	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	91,946,103	91,946,103	92,044,988	92,044,989
esv3689323	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	91,575,417	91,575,417	91,674,302	91,674,303

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16503630	duplication	LI-05	SNP array	SNP genotyping analysis	59

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
essv16503630	Remapped	Perfect	NC_000007.14:g.(91 946103_91946103)_( 92044988_92044989) dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	91,946,103	91,946,103	92,044,988	92,044,989
essv16503630	Submitted genomic		NC_000007.13:g.(91 575417_91575417)_( 91674302_91674303) dup98885	GRCh37 (hg19)		NC_000007.13	Chr7	91,575,417	91,575,417	91,674,302	91,674,303

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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