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dbVar

Database of genomic structural variation

esv3875960

Organism: Homo sapiens

Study:estd219 (1000 Genomes Consortium Phase 3 Integrated SV)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:20,440

Publication(s):1000 Genomes Consortium Phase 3 Integrated SV

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 284 SVs from 45 studies. See in: genome view

Remapped(Score: Perfect):90,106,229-90,126,904

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3875960	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	90,106,347 (-118, +118)	90,126,786 (-118, +118)
esv3875960	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	90,649,579 (-118, +118)	90,670,018 (-118, +118)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
essv23836117	inversion	HG02374	Sequencing	Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping	Heterozygous	3,698

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv23836117	Remapped	Perfect	NC_000015.10:g.(90 106229_90106465)_( 90126668_90126904) inv	GRCh38.p12	First Pass	NC_000015.10	Chr15	90,106,347 (-118, +118)	90,126,786 (-118, +118)
essv23836117	Submitted genomic		NC_000015.9:g.(906 49461_90649697)_(9 0669900_90670136)i nv	GRCh37 (hg19)		NC_000015.9	Chr15	90,649,579 (-118, +118)	90,670,018 (-118, +118)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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