nsv3097616
- Organism: Pan troglodytes
- Study:nstd144 (Gardner et al. 2017)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:Pan_troglodytes-2.1.4 (panTro4)
- Variant Calls:1
- Validation:Not tested
- Region Size:1
- Description:TSD=AGATTCCAAA;MEINFO=L1Ambig,5625,6019,+
- Publication(s):Gardner et al. 2017
Source: NCBI
Variant Region Placement Information
| Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|
| nsv3097616 | Submitted genomic | Pan_troglodytes-2.1.4 (panTro4) | Primary Assembly | GL391837.1 | Chr11|GL39 1837.1 | 704,083 | 704,083 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv14081904 | line1 insertion | Sequencing | Split read and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Assembly | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|
| nssv14081904 | Submitted genomic | Pan_troglodytes-2.1.4 (panTro4) | GL391837.1 | Chr11|GL39 1837.1 | 704,083 | 704,083 |