nsv3939904
- Organism: Homo sapiens
- Study:nstd167 (Wenger et al. 2019)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Wenger et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 236 SVs from 9 studies. See in: genome view
Overlapping variant regions from other studies: 234 SVs from 9 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3939904 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 150,000,915 | 150,000,915 |
| nsv3939904 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 149,169,146 | 149,169,146 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv15206220 | insertion | SAMN03283347 | Sequencing | de novo and local sequence assembly | Heterozygous | 30,634 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15206220 | Remapped | Perfect | NC_000023.11:g.150 000915_150000916in sTATATTATATATAATAA TATGTTATATATATTTAA TATAT | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 150,000,915 | 150,000,915 |
| nssv15206220 | Submitted genomic | NC_000023.10:g.149 169146_149169147in sTATATTATATATAATAA TATGTTATATATATTTAA TATAT | GRCh37 (hg19) | NC_000023.10 | ChrX | 149,169,146 | 149,169,146 |