nsv4449709
- Organism: Homo sapiens
- Study:nstd177 (Louzada et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:123,001
- Publication(s):Louzada et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 874 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 874 SVs from 83 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv4449709 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 143,834,586 | 143,836,586 | 143,954,586 | 143,957,586 |
| nsv4449709 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 144,755,739 | 144,757,739 | 144,875,739 | 144,878,739 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv15768589 | deletion | BR1099223302 | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv15768589 | Remapped | Perfect | NC_000004.12:g.(14 3834586_143836586) _(143954586_143957 586)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 143,834,586 | 143,836,586 | 143,954,586 | 143,957,586 |
| nssv15768589 | Submitted genomic | NC_000004.11:g.(14 4755739_144757739) _(144875739_144878 739)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 144,755,739 | 144,757,739 | 144,875,739 | 144,878,739 |