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dbVar

Database of genomic structural variation

nsv5544797

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 305 SVs from 18 studies. See in: genome view

Submitted genomic56,834,899-56,834,899

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5544797	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000024.10	ChrY	56,834,899	56,834,899
nsv5544797	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000024.9	ChrY	58,981,046	58,981,046

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17743016	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17743016	Submitted genomic		NC_000024.10:g.568 34899_56834900ins2 53	GRCh38 (hg38)		NC_000024.10	ChrY	56,834,899	56,834,899
nssv17743016	Remapped	Perfect	NC_000024.9:g.5898 1046_58981047ins25 3	GRCh37.p13	First Pass	NC_000024.9	ChrY	58,981,046	58,981,046

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17743016	<0.001	0	779

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