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dbVar

Database of genomic structural variation

nsv482936

Organism: Homo sapiens

Study:nstd41 (Iafrate et al. 2004)
Variant Type:copy number variation
Method Type:BAC aCGH
Submitted on:GRCh37 (hg19)

Variant Calls:9
Validation:Not tested
Clinical Assertions: No
Region Size:3,347,687

Publication(s):Iafrate et al. 2004

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 29319 SVs from 134 studies. See in: genome view

Remapped(Score: Good):103,533,664-106,881,350

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Stop	Outer Stop
nsv482936	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	103,533,664	106,881,350	-
nsv482936	Submitted cytogenetic		GRCh37 (hg19)	Primary Assembly		NC_000014.8	Chr14	104,000,001	-	107,349,540

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv2996024	copy number loss	BAC aCGH	Probe signal intensity
nssv2996028	copy number loss	BAC aCGH	Probe signal intensity
nssv2996081	copy number loss	BAC aCGH	Probe signal intensity
nssv2996083	copy number loss	BAC aCGH	Probe signal intensity
nssv2996121	copy number loss	BAC aCGH	Probe signal intensity
nssv2996185	copy number loss	BAC aCGH	Probe signal intensity
nssv2996263	copy number loss	BAC aCGH	Probe signal intensity
nssv2996520	copy number loss	BAC aCGH	Probe signal intensity
nssv2996562	copy number loss	BAC aCGH	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Stop	Outer Stop
nssv2996024	Remapped	Good	NC_000014.9:g.(103 533664_?)_(1068813 50_?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	103,533,664	106,881,350	-
nssv2996028	Remapped	Good	NC_000014.9:g.(103 533664_?)_(1068813 50_?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	103,533,664	106,881,350	-
nssv2996081	Remapped	Good	NC_000014.9:g.(103 533664_?)_(1068813 50_?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	103,533,664	106,881,350	-
nssv2996083	Remapped	Good	NC_000014.9:g.(103 533664_?)_(1068813 50_?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	103,533,664	106,881,350	-
nssv2996121	Remapped	Good	NC_000014.9:g.(103 533664_?)_(1068813 50_?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	103,533,664	106,881,350	-
nssv2996185	Remapped	Good	NC_000014.9:g.(103 533664_?)_(1068813 50_?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	103,533,664	106,881,350	-
nssv2996263	Remapped	Good	NC_000014.9:g.(103 533664_?)_(1068813 50_?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	103,533,664	106,881,350	-
nssv2996520	Remapped	Good	NC_000014.9:g.(103 533664_?)_(1068813 50_?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	103,533,664	106,881,350	-
nssv2996562	Remapped	Good	NC_000014.9:g.(103 533664_?)_(1068813 50_?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	103,533,664	106,881,350	-
nssv2996024	Submitted cytogenetic		NC_000014.8:g.(104 000001_?)_(?_10734 9540)del	GRCh37 (hg19)		NC_000014.8	Chr14	104,000,001	-	107,349,540
nssv2996028	Submitted cytogenetic		NC_000014.8:g.(104 000001_?)_(?_10734 9540)del	GRCh37 (hg19)		NC_000014.8	Chr14	104,000,001	-	107,349,540
nssv2996081	Submitted cytogenetic		NC_000014.8:g.(104 000001_?)_(?_10734 9540)del	GRCh37 (hg19)		NC_000014.8	Chr14	104,000,001	-	107,349,540
nssv2996083	Submitted cytogenetic		NC_000014.8:g.(104 000001_?)_(?_10734 9540)del	GRCh37 (hg19)		NC_000014.8	Chr14	104,000,001	-	107,349,540
nssv2996121	Submitted cytogenetic		NC_000014.8:g.(104 000001_?)_(?_10734 9540)del	GRCh37 (hg19)		NC_000014.8	Chr14	104,000,001	-	107,349,540
nssv2996185	Submitted cytogenetic		NC_000014.8:g.(104 000001_?)_(?_10734 9540)del	GRCh37 (hg19)		NC_000014.8	Chr14	104,000,001	-	107,349,540
nssv2996263	Submitted cytogenetic		NC_000014.8:g.(104 000001_?)_(?_10734 9540)del	GRCh37 (hg19)		NC_000014.8	Chr14	104,000,001	-	107,349,540
nssv2996520	Submitted cytogenetic		NC_000014.8:g.(104 000001_?)_(?_10734 9540)del	GRCh37 (hg19)		NC_000014.8	Chr14	104,000,001	-	107,349,540
nssv2996562	Submitted cytogenetic		NC_000014.8:g.(104 000001_?)_(?_10734 9540)del	GRCh37 (hg19)		NC_000014.8	Chr14	104,000,001	-	107,349,540

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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