nsv959506
- Organism: Homo sapiens
- Study:nstd86 (Poultney et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:20,025
- Publication(s):Poultney et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 214 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 206 SVs from 55 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv959506 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 72,946,135 | 72,966,159 |
| nsv959506 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 72,416,674 | 72,436,690 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3021969 | deletion | Sequencing | Read depth |
| nssv3020879 | deletion | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv3021969 | Remapped | Good | NC_000007.14:g.(72 945710_72945710)_( 72965757_72965757) del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 72,945,710 | 72,945,710 | 72,965,757 | 72,965,757 |
| nssv3020879 | Remapped | Pass | NC_000007.14:g.(72 945710_72945710)_( 73303413_73303413) del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 72,945,710 | 72,945,710 | 73,303,413 | 73,303,413 |
| nssv3021969 | Submitted genomic | NC_000007.13:g.(72 416249_72416674)_( 72430784_72436288) del | GRCh37 (hg19) | NC_000007.13 | Chr7 | 72,416,249 | 72,416,674 | 72,430,784 | 72,436,288 | ||
| nssv3020879 | Submitted genomic | NC_000007.13:g.(72 416249_72416674)_( 72436690_72717410) del | GRCh37 (hg19) | NC_000007.13 | Chr7 | 72,416,249 | 72,416,674 | 72,436,690 | 72,717,410 |