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dbVar

Database of genomic structural variation

nsv429710

Organism: Homo sapiens

Study:nstd11 (Walter et al. 2009)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:661,858

Publication(s):Walter et al. 2009

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2257 SVs from 86 studies. See in: genome view

Remapped(Score: Perfect):111,520,231-112,182,088

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv429710	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000009.12	Chr9	111,520,231	112,182,088
nsv429710	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000009.11	Chr9	114,282,511	114,944,368
nsv429710	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000009.10	Chr9	113,322,332	113,984,189

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation
nssv459496	copy number gain	SNP array	SNP genotyping analysis	Leukemia, Myeloid, Acute	not provided	Submitter

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv459496	Remapped	Perfect	NC_000009.12:g.(?_ 111520231)_(112182 088_?)dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	111,520,231	112,182,088
nssv459496	Remapped	Perfect	NC_000009.11:g.(?_ 114282511)_(114944 368_?)dup	GRCh37.p13	First Pass	NC_000009.11	Chr9	114,282,511	114,944,368
nssv459496	Submitted genomic		NC_000009.10:g.(?_ 113322332)_(113984 189_?)dup	NCBI36 (hg18)		NC_000009.10	Chr9	113,322,332	113,984,189

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation
nssv459496	NCBI36: NC_000009.10:g.(?_113322332)_(113984189_?)dup	copy number gain	somatic	Leukemia, Myeloid, Acute	not provided	Submitter

No genotype data were submitted for this variant

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