nsv436055
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,952,473
- Description:Unmated-Insertion
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 18333 SVs from 136 studies. See in: genome view
Overlapping variant regions from other studies: 20133 SVs from 139 studies. See in: genome view
Overlapping variant regions from other studies: 6822 SVs from 42 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv436055 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | - | 23,319,714 | 28,272,186 |
| nsv436055 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 23,109,972 | - | 28,517,332 |
| nsv436055 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 20,661,413 | - | 26,190,927 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv466803 | insertion | SAMN00000376 | Sequencing | Paired-end mapping | 468 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nssv466803 | Remapped | Pass | NC_000015.10:g.(?_ 23319714)_(?_28272 186)ins? | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | - | 23,319,714 | 28,272,186 |
| nssv466803 | Remapped | Good | NC_000015.9:g.(231 09972_?)_(?_285173 32)ins? | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 23,109,972 | - | 28,517,332 |
| nssv466803 | Submitted genomic | NC_000015.8:g.(206 61413_?)_(?_261909 27)ins(0_?) | NCBI36 (hg18) | NC_000015.8 | Chr15 | 20,661,413 | - | 26,190,927 |