nsv436194
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:7,486,443
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 25302 SVs from 144 studies. See in: genome view
Overlapping variant regions from other studies: 26168 SVs from 145 studies. See in: genome view
Overlapping variant regions from other studies: 8709 SVs from 43 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv436194 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | - | 23,319,714 | 30,806,156 |
| nsv436194 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 23,285,703 | - | 31,098,359 |
| nsv436194 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 20,837,144 | - | 28,885,651 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv466804 | deletion | SAMN00001583 | Sequencing | Paired-end mapping | 822 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nssv466804 | Remapped | Pass | NC_000015.10:g.(?_ 23319714)_(?_30806 156)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | - | 23,319,714 | 30,806,156 |
| nssv466804 | Remapped | Good | NC_000015.9:g.(232 85703_?)_(?_310983 59)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 23,285,703 | - | 31,098,359 |
| nssv466804 | Submitted genomic | NC_000015.8:g.(208 37144_?)_(?_288856 51)del | NCBI36 (hg18) | NC_000015.8 | Chr15 | 20,837,144 | - | 28,885,651 |