nsv471636
- Organism: Homo sapiens
- Study:nstd32 (Sharp et al. 2005)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:14
- Validation:Not tested
- Clinical Assertions: No
- Region Size:197,092
- Publication(s):Sharp et al. 2005
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 568 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 567 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 6 SVs from 2 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv471636 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 26,873,305 | 27,070,396 |
| nsv471636 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 26,841,084 | 27,038,175 |
| nsv471636 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000006.8 | Chr6 | 26,949,063 | 27,146,154 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv549570 | copy number gain | GM10470A | BAC aCGH | Probe signal intensity | 49 |
| nssv549571 | copy number gain | GM10496A | BAC aCGH | Probe signal intensity | 59 |
| nssv549572 | copy number gain | GM15725 | BAC aCGH | Probe signal intensity | 50 |
| nssv549573 | copy number gain | GM15729 | BAC aCGH | Probe signal intensity | 47 |
| nssv549574 | copy number gain | GM17017 | BAC aCGH | Probe signal intensity | 57 |
| nssv549575 | copy number gain | JK1058B | BAC aCGH | Probe signal intensity | 61 |
| nssv549576 | copy number gain | JK776 | BAC aCGH | Probe signal intensity | 50 |
| nssv650996 | copy number gain | GM17017 | BAC aCGH | Probe signal intensity | 57 |
| nssv549611 | copy number gain | GM10470A | BAC aCGH | Probe signal intensity | 49 |
| nssv549612 | copy number gain | GM10496A | BAC aCGH | Probe signal intensity | 59 |
| nssv549613 | copy number gain | GM15725 | BAC aCGH | Probe signal intensity | 50 |
| nssv549614 | copy number loss | GM15726 | BAC aCGH | Probe signal intensity | 41 |
| nssv549615 | copy number gain | JK1058B | BAC aCGH | Probe signal intensity | 61 |
| nssv549616 | copy number loss | JK1061 | BAC aCGH | Probe signal intensity | 51 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv549570 | Remapped | Perfect | NC_000006.12:g.(?_ 26873305)_(2703145 1_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,873,305 | 27,031,451 |
| nssv549571 | Remapped | Perfect | NC_000006.12:g.(?_ 26873305)_(2703145 1_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,873,305 | 27,031,451 |
| nssv549572 | Remapped | Perfect | NC_000006.12:g.(?_ 26873305)_(2703145 1_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,873,305 | 27,031,451 |
| nssv549573 | Remapped | Perfect | NC_000006.12:g.(?_ 26873305)_(2703145 1_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,873,305 | 27,031,451 |
| nssv549574 | Remapped | Perfect | NC_000006.12:g.(?_ 26873305)_(2703145 1_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,873,305 | 27,031,451 |
| nssv549575 | Remapped | Perfect | NC_000006.12:g.(?_ 26873305)_(2703145 1_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,873,305 | 27,031,451 |
| nssv549576 | Remapped | Perfect | NC_000006.12:g.(?_ 26873305)_(2703145 1_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,873,305 | 27,031,451 |
| nssv650996 | Remapped | Perfect | NC_000006.12:g.(?_ 26873305)_(2703145 1_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,873,305 | 27,031,451 |
| nssv549611 | Remapped | Perfect | NC_000006.12:g.(?_ 26925961)_(2707039 6_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,925,961 | 27,070,396 |
| nssv549612 | Remapped | Perfect | NC_000006.12:g.(?_ 26925961)_(2707039 6_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,925,961 | 27,070,396 |
| nssv549613 | Remapped | Perfect | NC_000006.12:g.(?_ 26925961)_(2707039 6_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,925,961 | 27,070,396 |
| nssv549614 | Remapped | Perfect | NC_000006.12:g.(?_ 26925961)_(2707039 6_?)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,925,961 | 27,070,396 |
| nssv549615 | Remapped | Perfect | NC_000006.12:g.(?_ 26925961)_(2707039 6_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,925,961 | 27,070,396 |
| nssv549616 | Remapped | Perfect | NC_000006.12:g.(?_ 26925961)_(2707039 6_?)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 26,925,961 | 27,070,396 |
| nssv549570 | Remapped | Perfect | NC_000006.11:g.(?_ 26841084)_(2699923 0_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,841,084 | 26,999,230 |
| nssv549571 | Remapped | Perfect | NC_000006.11:g.(?_ 26841084)_(2699923 0_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,841,084 | 26,999,230 |
| nssv549572 | Remapped | Perfect | NC_000006.11:g.(?_ 26841084)_(2699923 0_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,841,084 | 26,999,230 |
| nssv549573 | Remapped | Perfect | NC_000006.11:g.(?_ 26841084)_(2699923 0_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,841,084 | 26,999,230 |
| nssv549574 | Remapped | Perfect | NC_000006.11:g.(?_ 26841084)_(2699923 0_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,841,084 | 26,999,230 |
| nssv549575 | Remapped | Perfect | NC_000006.11:g.(?_ 26841084)_(2699923 0_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,841,084 | 26,999,230 |
| nssv549576 | Remapped | Perfect | NC_000006.11:g.(?_ 26841084)_(2699923 0_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,841,084 | 26,999,230 |
| nssv650996 | Remapped | Perfect | NC_000006.11:g.(?_ 26841084)_(2699923 0_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,841,084 | 26,999,230 |
| nssv549611 | Remapped | Perfect | NC_000006.11:g.(?_ 26893740)_(2703817 5_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,893,740 | 27,038,175 |
| nssv549612 | Remapped | Perfect | NC_000006.11:g.(?_ 26893740)_(2703817 5_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,893,740 | 27,038,175 |
| nssv549613 | Remapped | Perfect | NC_000006.11:g.(?_ 26893740)_(2703817 5_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,893,740 | 27,038,175 |
| nssv549614 | Remapped | Perfect | NC_000006.11:g.(?_ 26893740)_(2703817 5_?)del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,893,740 | 27,038,175 |
| nssv549615 | Remapped | Perfect | NC_000006.11:g.(?_ 26893740)_(2703817 5_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,893,740 | 27,038,175 |
| nssv549616 | Remapped | Perfect | NC_000006.11:g.(?_ 26893740)_(2703817 5_?)del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,893,740 | 27,038,175 |
| nssv549570 | Submitted genomic | NC_000006.8:g.(?_2 6949063)_(27107209 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 26,949,063 | 27,107,209 | ||
| nssv549571 | Submitted genomic | NC_000006.8:g.(?_2 6949063)_(27107209 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 26,949,063 | 27,107,209 | ||
| nssv549572 | Submitted genomic | NC_000006.8:g.(?_2 6949063)_(27107209 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 26,949,063 | 27,107,209 | ||
| nssv549573 | Submitted genomic | NC_000006.8:g.(?_2 6949063)_(27107209 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 26,949,063 | 27,107,209 | ||
| nssv549574 | Submitted genomic | NC_000006.8:g.(?_2 6949063)_(27107209 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 26,949,063 | 27,107,209 | ||
| nssv549575 | Submitted genomic | NC_000006.8:g.(?_2 6949063)_(27107209 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 26,949,063 | 27,107,209 | ||
| nssv549576 | Submitted genomic | NC_000006.8:g.(?_2 6949063)_(27107209 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 26,949,063 | 27,107,209 | ||
| nssv650996 | Submitted genomic | NC_000006.8:g.(?_2 6949063)_(27107209 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 26,949,063 | 27,107,209 | ||
| nssv549611 | Submitted genomic | NC_000006.8:g.(?_2 7001719)_(27146154 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 27,001,719 | 27,146,154 | ||
| nssv549612 | Submitted genomic | NC_000006.8:g.(?_2 7001719)_(27146154 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 27,001,719 | 27,146,154 | ||
| nssv549613 | Submitted genomic | NC_000006.8:g.(?_2 7001719)_(27146154 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 27,001,719 | 27,146,154 | ||
| nssv549614 | Submitted genomic | NC_000006.8:g.(?_2 7001719)_(27146154 _?)del | NCBI34 (hg16) | NC_000006.8 | Chr6 | 27,001,719 | 27,146,154 | ||
| nssv549615 | Submitted genomic | NC_000006.8:g.(?_2 7001719)_(27146154 _?)dup | NCBI34 (hg16) | NC_000006.8 | Chr6 | 27,001,719 | 27,146,154 | ||
| nssv549616 | Submitted genomic | NC_000006.8:g.(?_2 7001719)_(27146154 _?)del | NCBI34 (hg16) | NC_000006.8 | Chr6 | 27,001,719 | 27,146,154 |