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dbVar

Database of genomic structural variation

nsv1067818

Organism: Homo sapiens

Study:nstd98 (Campbell et al. 2014b)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:3,375,992

Publication(s):Campbell et al. 2014

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 7653 SVs from 113 studies. See in: genome view

Remapped(Score: Perfect):112,419,960-115,795,951

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv1067818	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	112,419,960	112,420,012	115,795,899	115,795,951
nsv1067818	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	112,138,807	112,138,859	115,514,746	115,514,798

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv3761530	deletion	Sequencing	Sequence alignment
nssv3761537	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv3761530	Remapped	Perfect	NC_000003.12:g.(11 2419960_112420012) _(115795899_115795 951)del	GRCh38.p12	First Pass	NC_000003.12	Chr3	112,419,960	112,420,012	115,795,899	115,795,951
nssv3761537	Remapped	Perfect	NC_000003.12:g.(11 2419960_112420012) _(115795899_115795 951)del	GRCh38.p12	First Pass	NC_000003.12	Chr3	112,419,960	112,420,012	115,795,899	115,795,951
nssv3761530	Submitted genomic		NC_000003.11:g.(11 2138807_112138859) _(115514746_115514 798)del	GRCh37 (hg19)		NC_000003.11	Chr3	112,138,807	112,138,859	115,514,746	115,514,798
nssv3761537	Submitted genomic		NC_000003.11:g.(11 2138807_112138859) _(115514746_115514 798)del	GRCh37 (hg19)		NC_000003.11	Chr3	112,138,807	112,138,859	115,514,746	115,514,798

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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