nsv1152915
- Organism: Homo sapiens
- Study:nstd107 (John et al. 2014)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:117
- Publication(s):John et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 247 SVs from 44 studies. See in: genome view
Overlapping variant regions from other studies: 50 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 247 SVs from 44 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1152915 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 2,462,256 | 2,462,372 |
| nsv1152915 | Remapped | Perfect | GRCh38.p12 | PATCHES | Second Pass | NW_018654718.1 | Chr12|NW_0 18654718.1 | 810,372 | 810,488 |
| nsv1152915 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 2,571,422 | 2,571,538 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv3997952 | insertion | KWB1 | Sequencing | Read depth and paired-end mapping | 8,440 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3997952 | Remapped | Perfect | NW_018654718.1:g.( 810372_?)_(?_81048 8)ins? | GRCh38.p12 | Second Pass | NW_018654718.1 | Chr12|NW_0 18654718.1 | 810,372 | 810,488 |
| nssv3997952 | Remapped | Perfect | NC_000012.12:g.(24 62256_?)_(?_246237 2)ins? | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 2,462,256 | 2,462,372 |
| nssv3997952 | Submitted genomic | NC_000012.11:g.(25 71422_?)_(?_257153 8)ins(0_?) | GRCh37 (hg19) | NC_000012.11 | Chr12 | 2,571,422 | 2,571,538 |