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nsv2750201

  • Variant Calls:2
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:488,900

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 1939 SVs from 86 studies. See in: genome view    
Remapped(Score: Pass):54,451,197-54,911,985Question Mark
Overlapping variant regions from other studies: 2063 SVs from 85 studies. See in: genome view    
Remapped(Score: Pass):433,488-894,467Question Mark
Overlapping variant regions from other studies: 4 SVs from 4 studies. See in: genome view    
Remapped(Score: Pass):3-248,807Question Mark
Overlapping variant regions from other studies: 6 SVs from 5 studies. See in: genome view    
Remapped(Score: Pass):4-282,224Question Mark
Overlapping variant regions from other studies: 436 SVs from 57 studies. See in: genome view    
Remapped(Score: Pass):363,080-652,590Question Mark
Overlapping variant regions from other studies: 930 SVs from 69 studies. See in: genome view    
Remapped(Score: Good):355,882-844,781Question Mark
Overlapping variant regions from other studies: 898 SVs from 66 studies. See in: genome view    
Remapped(Score: Good):357,709-843,827Question Mark
Overlapping variant regions from other studies: 3 SVs from 3 studies. See in: genome view    
Remapped(Score: Pass):1-293,522Question Mark
Overlapping variant regions from other studies: 1582 SVs from 55 studies. See in: genome view    
Remapped(Score: Pass):667,012-914,797Question Mark
Overlapping variant regions from other studies: 916 SVs from 31 studies. See in: genome view    
Submitted genomic59,654,186-60,143,609Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv2750201RemappedPassGRCh38.p12Primary AssemblySecond PassNC_000019.10Chr1954,451,19754,911,985
nsv2750201RemappedPassGRCh38.p12ALT_REF_LOCI_9First PassNT_187693.1Chr19|NT_1
87693.1		433,488894,467
nsv2750201RemappedPassGRCh38.p12ALT_REF_LOCI_10Second PassNT_187636.1Chr19|NT_1
87636.1		3248,807
nsv2750201RemappedPassGRCh38.p12ALT_REF_LOCI_27Second PassNT_187675.1Chr19|NT_1
87675.1		4282,224
nsv2750201RemappedPassGRCh38.p12ALT_REF_LOCI_8Second PassNW_003571061.2Chr19|NW_0
03571061.2		363,080652,590
nsv2750201RemappedGoodGRCh38.p12ALT_REF_LOCI_7Second PassNW_003571060.1Chr19|NW_0
03571060.1		355,882844,781
nsv2750201RemappedGoodGRCh38.p12ALT_REF_LOCI_1Second PassNW_003571054.1Chr19|NW_0
03571054.1		357,709843,827
nsv2750201RemappedPassGRCh38.p12PATCHESSecond PassNW_016107303.1Chr19|NW_0
16107303.1		1293,522
nsv2750201RemappedPassGRCh37.p13PATCHESFirst PassNW_004166865.1Chr19|NW_0
04166865.1		667,012914,797
nsv2750201Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000019.8Chr1959,654,18660,143,609

Variant Call Information

Variant Call IDTypeMethodAnalysis
nssv13594704duplicationSNP arrayProbe signal intensity
nssv13601621duplicationSNP arrayProbe signal intensity

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv13594704RemappedPassNT_187636.1:g.(?_3
)_(248807_?)dup		GRCh38.p12Second PassNT_187636.1Chr19|NT_1
87636.1		3248,807
nssv13601621RemappedPassNT_187636.1:g.(?_3
)_(248807_?)dup		GRCh38.p12Second PassNT_187636.1Chr19|NT_1
87636.1		3248,807
nssv13594704RemappedPassNT_187675.1:g.(?_4
)_(282224_?)dup		GRCh38.p12Second PassNT_187675.1Chr19|NT_1
87675.1		4282,224
nssv13601621RemappedPassNT_187675.1:g.(?_4
)_(282224_?)dup		GRCh38.p12Second PassNT_187675.1Chr19|NT_1
87675.1		4282,224
nssv13594704RemappedPassNT_187693.1:g.(?_4
33488)_(894467_?)d
up		GRCh38.p12First PassNT_187693.1Chr19|NT_1
87693.1		433,488894,467
nssv13601621RemappedPassNT_187693.1:g.(?_4
33488)_(894467_?)d
up		GRCh38.p12First PassNT_187693.1Chr19|NT_1
87693.1		433,488894,467
nssv13594704RemappedPassNW_003571061.2:g.(
?_363080)_(652590_
?)dup		GRCh38.p12Second PassNW_003571061.2Chr19|NW_0
03571061.2		363,080652,590
nssv13601621RemappedPassNW_003571061.2:g.(
?_363080)_(652590_
?)dup		GRCh38.p12Second PassNW_003571061.2Chr19|NW_0
03571061.2		363,080652,590
nssv13594704RemappedGoodNW_003571060.1:g.(
?_355882)_(844781_
?)dup		GRCh38.p12Second PassNW_003571060.1Chr19|NW_0
03571060.1		355,882844,781
nssv13601621RemappedGoodNW_003571060.1:g.(
?_355882)_(844781_
?)dup		GRCh38.p12Second PassNW_003571060.1Chr19|NW_0
03571060.1		355,882844,781
nssv13594704RemappedPassNW_016107303.1:g.(
?_1)_(293522_?)dup		GRCh38.p12Second PassNW_016107303.1Chr19|NW_0
16107303.1		1293,522
nssv13601621RemappedPassNW_016107303.1:g.(
?_1)_(293522_?)dup		GRCh38.p12Second PassNW_016107303.1Chr19|NW_0
16107303.1		1293,522
nssv13594704RemappedGoodNW_003571054.1:g.(
?_357709)_(843827_
?)dup		GRCh38.p12Second PassNW_003571054.1Chr19|NW_0
03571054.1		357,709843,827
nssv13601621RemappedGoodNW_003571054.1:g.(
?_357709)_(843827_
?)dup		GRCh38.p12Second PassNW_003571054.1Chr19|NW_0
03571054.1		357,709843,827
nssv13594704RemappedPassNC_000019.10:g.(?_
54451197)_(5491198
5_?)dup		GRCh38.p12Second PassNC_000019.10Chr1954,451,19754,911,985
nssv13601621RemappedPassNC_000019.10:g.(?_
54451197)_(5491198
5_?)dup		GRCh38.p12Second PassNC_000019.10Chr1954,451,19754,911,985
nssv13594704RemappedPassNW_004166865.1:g.(
?_667012)_(914797_
?)dup		GRCh37.p13First PassNW_004166865.1Chr19|NW_0
04166865.1		667,012914,797
nssv13601621RemappedPassNW_004166865.1:g.(
?_667012)_(914797_
?)dup		GRCh37.p13First PassNW_004166865.1Chr19|NW_0
04166865.1		667,012914,797
nssv13594704Submitted genomicNC_000019.8:g.(?_5
9654186)_(60143609
_?)dup		NCBI36 (hg18)NC_000019.8Chr1959,654,18660,143,609
nssv13601621Submitted genomicNC_000019.8:g.(?_5
9654186)_(60143609
_?)dup		NCBI36 (hg18)NC_000019.8Chr1959,654,18660,143,609

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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