nsv2768229
- Organism: Homo sapiens
- Study:nstd125 (Wills et al. 2016)
- Variant Type:copy-neutral loss of heterozygosity
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:13,138,492
- Publication(s):Wills et al. 2016
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 30747 SVs from 131 studies. See in: genome view
Overlapping variant regions from other studies: 30725 SVs from 131 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv2768229 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 39,832,113 | 52,970,604 |
| nsv2768229 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 39,873,604 | 53,004,620 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv13638273 | copy-neutral loss of heterozygosity | 25 | SNP array | SNP genotyping analysis | nssv13638272, nssv13638274 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|
| nssv13638273 | Remapped | Good | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 39,832,113 | 52,970,604 |
| nssv13638273 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 39,873,604 | 53,004,620 |