nsv3168877
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:32,982,367
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 76424 SVs from 145 studies. See in: genome view
Overlapping variant regions from other studies: 76341 SVs from 145 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3168877 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 38,442,127 (-162, +162) | 71,424,493 (-162, +162) |
| nsv3168877 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 38,483,618 (-162, +162) | 71,473,644 (-162, +162) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14239544 | duplication | DB111 | Sequencing | Paired-end mapping | 43 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14239544 | Remapped | Good | NC_000003.12:g.(38 441965_38442289)_( 71424331_71424655) dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 38,442,127 (-162, +162) | 71,424,493 (-162, +162) |
| nssv14239544 | Submitted genomic | NC_000003.11:g.(38 483456_38483780)_( 71473482_71473806) dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 38,483,618 (-162, +162) | 71,473,644 (-162, +162) |