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dbVar

Database of genomic structural variation

nsv3169252

Organism: Homo sapiens

Study:nstd158 (Cleal et al. 2019)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:108,812

Publication(s):Cleal et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 422 SVs from 47 studies. See in: genome view

Remapped(Score: Perfect):155,085,815-155,195,074

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3169252	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	155,086,039 (-224, +224)	155,194,850 (-224, +224)
nsv3169252	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	155,407,173 (-224, +224)	155,515,984 (-224, +224)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14238927	deletion	DB54	Sequencing	Paired-end mapping	22

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14238927	Remapped	Perfect	NC_000006.12:g.(15 5085815_155086263) _(155194626_155195 074)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	155,086,039 (-224, +224)	155,194,850 (-224, +224)
nssv14238927	Submitted genomic		NC_000006.11:g.(15 5406949_155407397) _(155515760_155516 208)del	GRCh37 (hg19)		NC_000006.11	Chr6	155,407,173 (-224, +224)	155,515,984 (-224, +224)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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