nsv3412827

Organism: Homo sapiens

Study:nstd162 (Audano et al. 2019)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:11
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Audano et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 128 SVs from 40 studies. See in: genome view

Submitted genomic64,809,514-64,809,514

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3412827	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000007.14	Chr7	64,809,514	64,809,514
nsv3412827	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14733279	sva insertion	SAMN04229552	Sequencing	de novo and local sequence assembly	24,632
nssv14737290	sva insertion	SAMN03838746	Sequencing	de novo and local sequence assembly	26,336
nssv14737370	sva insertion	SAMN06885952	Sequencing	de novo and local sequence assembly	28,070
nssv14738674	sva insertion	SAMN09651199	Sequencing	de novo and local sequence assembly	27,381
nssv14741884	sva insertion	SAMN05603729	Sequencing	de novo and local sequence assembly	24,108
nssv14742630	sva insertion	SAMN09690649	Sequencing	de novo and local sequence assembly	21,495
nssv14744386	sva insertion	SAMN05603745	Sequencing	de novo and local sequence assembly	27,447
nssv14744442	sva insertion	SAMN05603847	Sequencing	de novo and local sequence assembly	26,021
nssv14744612	sva insertion	SAMN05181962	Sequencing	de novo and local sequence assembly	23,563
nssv14745680	sva insertion	SAMN04251426	Sequencing	de novo and local sequence assembly	22,074
nssv14746127	sva insertion	SAMN09643900	Sequencing	de novo and local sequence assembly	26,631

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14733279	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14737290	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14737370	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14738674	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14741884	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14742630	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14744386	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14744442	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14744612	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14745680	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14746127	Submitted genomic		NC_000007.14:g.648 09514_64809515ins1 25	GRCh38 (hg38)		NC_000007.14	Chr7	64,809,514	64,809,514
nssv14733279	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892
nssv14737290	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892
nssv14737370	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892
nssv14738674	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892
nssv14741884	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892
nssv14742630	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892
nssv14744386	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892
nssv14744442	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892
nssv14744612	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892
nssv14745680	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892
nssv14746127	Remapped	Perfect	NC_000007.13:g.642 69892_64269893ins1 25NC_000007.13:g.6 4269892_64269893in s125	GRCh37.p13	First Pass	NC_000007.13	Chr7	64,269,892	64,269,892

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dbVar

Database of genomic structural variation

nsv3412827

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant