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dbVar

Database of genomic structural variation

nsv3415765

Organism: Homo sapiens

Study:nstd162 (Audano et al. 2019)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Audano et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 88 SVs from 25 studies. See in: genome view

Submitted genomic37,293,059-37,293,059

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3415765	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000007.14	Chr7	37,293,059	37,293,059
nsv3415765	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	37,332,663	37,332,663

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14732235	sva insertion	SAMN05603847	Sequencing	de novo and local sequence assembly	26,021
nssv14736191	sva insertion	SAMN04251426	Sequencing	de novo and local sequence assembly	22,074
nssv14741254	sva insertion	SAMN04229548	Sequencing	de novo and local sequence assembly	23,009

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14732235	Submitted genomic		NC_000007.14:g.372 93059_37293060ins1 29	GRCh38 (hg38)		NC_000007.14	Chr7	37,293,059	37,293,059
nssv14736191	Submitted genomic		NC_000007.14:g.372 93059_37293060ins1 29	GRCh38 (hg38)		NC_000007.14	Chr7	37,293,059	37,293,059
nssv14741254	Submitted genomic		NC_000007.14:g.372 93059_37293060ins1 29	GRCh38 (hg38)		NC_000007.14	Chr7	37,293,059	37,293,059
nssv14732235	Remapped	Perfect	NC_000007.13:g.373 32663_37332664ins1 29NC_000007.13:g.3 7332663_37332664in s129	GRCh37.p13	First Pass	NC_000007.13	Chr7	37,332,663	37,332,663
nssv14736191	Remapped	Perfect	NC_000007.13:g.373 32663_37332664ins1 29NC_000007.13:g.3 7332663_37332664in s129	GRCh37.p13	First Pass	NC_000007.13	Chr7	37,332,663	37,332,663
nssv14741254	Remapped	Perfect	NC_000007.13:g.373 32663_37332664ins1 29NC_000007.13:g.3 7332663_37332664in s129	GRCh37.p13	First Pass	NC_000007.13	Chr7	37,332,663	37,332,663

Showing 6 of 9

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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