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dbVar

Database of genomic structural variation

nsv4043740

Organism: Homo sapiens

Study:nstd166 (gnomAD Structural Variants)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:9
Validation:Not tested
Clinical Assertions: No
Region Size:34,600

Publication(s):gnomAD_Structural_Variants

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 51 SVs from 5 studies. See in: genome view

Remapped(Score: Good):60,001-94,600

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4043740	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	60,001	94,600
nsv4043740	Submitted genomic		GRCh37.p13	Primary Assembly		NC_000019.9	Chr19	60,000	94,600

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv15780381	copy number variation	Sequencing	Other	0
nssv15780382	copy number variation	Sequencing	Other	1
nssv15780383	copy number variation	Sequencing	Other	2
nssv15780384	copy number variation	Sequencing	Other	3
nssv15780385	copy number variation	Sequencing	Other	4
nssv15780386	copy number variation	Sequencing	Other	5
nssv15780387	copy number variation	Sequencing	Other	6
nssv15780388	copy number variation	Sequencing	Other	7
nssv15780389	copy number variation	Sequencing	Other	8

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv15780381	Remapped	Good	GRCh38.p12	First Pass	NC_000019.10	Chr19	60,001	94,600
nssv15780382	Remapped	Good	GRCh38.p12	First Pass	NC_000019.10	Chr19	60,001	94,600
nssv15780383	Remapped	Good	GRCh38.p12	First Pass	NC_000019.10	Chr19	60,001	94,600
nssv15780384	Remapped	Good	GRCh38.p12	First Pass	NC_000019.10	Chr19	60,001	94,600
nssv15780385	Remapped	Good	GRCh38.p12	First Pass	NC_000019.10	Chr19	60,001	94,600
nssv15780386	Remapped	Good	GRCh38.p12	First Pass	NC_000019.10	Chr19	60,001	94,600
nssv15780387	Remapped	Good	GRCh38.p12	First Pass	NC_000019.10	Chr19	60,001	94,600
nssv15780388	Remapped	Good	GRCh38.p12	First Pass	NC_000019.10	Chr19	60,001	94,600
nssv15780389	Remapped	Good	GRCh38.p12	First Pass	NC_000019.10	Chr19	60,001	94,600
nssv15780381	Submitted genomic		GRCh37.p13		NC_000019.9	Chr19	60,000	94,600
nssv15780382	Submitted genomic		GRCh37.p13		NC_000019.9	Chr19	60,000	94,600
nssv15780383	Submitted genomic		GRCh37.p13		NC_000019.9	Chr19	60,000	94,600
nssv15780384	Submitted genomic		GRCh37.p13		NC_000019.9	Chr19	60,000	94,600
nssv15780385	Submitted genomic		GRCh37.p13		NC_000019.9	Chr19	60,000	94,600
nssv15780386	Submitted genomic		GRCh37.p13		NC_000019.9	Chr19	60,000	94,600
nssv15780387	Submitted genomic		GRCh37.p13		NC_000019.9	Chr19	60,000	94,600
nssv15780388	Submitted genomic		GRCh37.p13		NC_000019.9	Chr19	60,000	94,600
nssv15780389	Submitted genomic		GRCh37.p13		NC_000019.9	Chr19	60,000	94,600

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv15780381	<0.001	0	10847
nssv15780382	0.002	23	10847
nssv15780383	0.199	2155	10847
nssv15780384	0.419	4544	10847
nssv15780385	0.288	3128	10847
nssv15780386	0.078	848	10847
nssv15780387	0.012	130	10847
nssv15780388	0.002	19	10847
nssv15780389	<0.001	0	10847

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