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dbVar

Database of genomic structural variation

nsv428163

Organism: Homo sapiens

Study:nstd8 (Perry et al. 2008b)
Variant Type:copy number variation
Method Type:BAC aCGH
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:156,014

Publication(s):Perry et al. 2008

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 350 SVs from 51 studies. See in: genome view

Remapped(Score: Good):39,087,931-39,243,944

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv428163	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	39,087,931	39,243,944
nsv428163	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	39,127,531	39,283,543
nsv428163	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000007.12	Chr7	39,094,056	39,250,068

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv450924	copy number loss	NA19113	BAC aCGH	Probe signal intensity	122
nssv450925	copy number loss	NA19189	BAC aCGH	Probe signal intensity	94

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv450924	Remapped	Good	NC_000007.14:g.(?_ 39087931)_(3924394 4_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	39,087,931	39,243,944
nssv450925	Remapped	Good	NC_000007.14:g.(?_ 39087931)_(3924394 4_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	39,087,931	39,243,944
nssv450924	Remapped	Perfect	NC_000007.13:g.(?_ 39127531)_(3928354 3_?)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	39,127,531	39,283,543
nssv450925	Remapped	Perfect	NC_000007.13:g.(?_ 39127531)_(3928354 3_?)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	39,127,531	39,283,543
nssv450924	Submitted genomic		NC_000007.12:g.(?_ 39094056)_(3925006 8_?)del	NCBI36 (hg18)		NC_000007.12	Chr7	39,094,056	39,250,068
nssv450925	Submitted genomic		NC_000007.12:g.(?_ 39094056)_(3925006 8_?)del	NCBI36 (hg18)		NC_000007.12	Chr7	39,094,056	39,250,068

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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