nsv4365794
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:17
- Validation:Not tested
- Clinical Assertions: No
- Region Size:69,143
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1638 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 1286 SVs from 78 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4365794 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nsv4365794 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15619389 | copy number gain | 1-0900-003 | SNP array | Genotyping | 20 |
| nssv15620513 | copy number gain | 1-0942-003 | SNP array | Genotyping | 22 |
| nssv15620993 | copy number gain | 1-0969-003 | SNP array | Genotyping | 20 |
| nssv15630270 | copy number gain | 1-0572-003 | SNP array | Genotyping | 16 |
| nssv15636812 | copy number gain | 13-0161-001 | SNP array | Genotyping | 16 |
| nssv15638937 | copy number gain | 14-0039-002 | SNP array | Genotyping | 27 |
| nssv15641660 | copy number gain | 14-0243-003 | SNP array | Genotyping | 27 |
| nssv15648557 | copy number gain | 2-1246-001 | SNP array | Genotyping | 26 |
| nssv15666811 | copy number gain | 7-0112-003 | SNP array | Genotyping | 26 |
| nssv15670641 | copy number gain | 7-0200-003 | SNP array | Genotyping | 24 |
| nssv15673183 | copy number gain | 9-0029-002 | SNP array | Genotyping | 19 |
| nssv15677810 | copy number gain | 235985S | SNP array | Genotyping | 19 |
| nssv15678981 | copy number gain | 240259S | SNP array | Genotyping | 18 |
| nssv15681616 | copy number gain | 241597S | SNP array | Genotyping | 18 |
| nssv15683408 | copy number gain | OCD122-S_1638 | SNP array | Genotyping | 18 |
| nssv15696731 | copy number gain | 217438 | SNP array | Genotyping | 25 |
| nssv15698287 | copy number gain | 146307 | SNP array | Genotyping | 20 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15619389 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15620513 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15620993 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15630270 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15636812 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15638937 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15641660 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15648557 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15666811 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15670641 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15673183 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15677810 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15678981 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15681616 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15683408 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15696731 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15698287 | Remapped | Pass | NC_000014.9:g.(?_1 06702210)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,702,210 | 106,771,352 |
| nssv15619389 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15620513 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15620993 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15630270 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15636812 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15638937 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15641660 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15648557 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15666811 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15670641 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15673183 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15677810 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15678981 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15681616 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15683408 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15696731 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 | ||
| nssv15698287 | Submitted genomic | NC_000014.8:g.(?_1 07158227)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,158,227 | 107,179,594 |