nsv4365904
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:21
- Validation:Not tested
- Clinical Assertions: No
- Region Size:553,343
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2918 SVs from 96 studies. See in: genome view
Overlapping variant regions from other studies: 3055 SVs from 102 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4365904 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nsv4365904 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15618877 | copy number gain | 1-0892-003 | SNP array | Genotyping | 21 |
| nssv15637702 | copy number gain | 14-0134-004 | SNP array | Genotyping | 23 |
| nssv15656690 | copy number gain | 3-0361-000 | SNP array | Genotyping | 19 |
| nssv15668522 | copy number gain | 7-0225-003 | SNP array | Genotyping | 17 |
| nssv15673246 | copy number gain | 9-0036-003 | SNP array | Genotyping | 24 |
| nssv15674867 | copy number gain | 208026 | SNP array | Genotyping | 20 |
| nssv15675789 | copy number gain | 175082 | SNP array | Genotyping | 21 |
| nssv15676171 | copy number gain | 246957S | SNP array | Genotyping | 21 |
| nssv15677422 | copy number gain | 162337 | SNP array | Genotyping | 17 |
| nssv15677762 | copy number gain | 237208S | SNP array | Genotyping | 24 |
| nssv15678817 | copy number gain | 176003 | SNP array | Genotyping | 21 |
| nssv15679231 | copy number gain | 227875 | SNP array | Genotyping | 22 |
| nssv15679400 | copy number gain | 222679 | SNP array | Genotyping | 12 |
| nssv15679600 | copy number gain | 182123 | SNP array | Genotyping | 24 |
| nssv15680315 | copy number gain | 227578 | SNP array | Genotyping | 20 |
| nssv15681093 | copy number gain | 181221 | SNP array | Genotyping | 20 |
| nssv15681835 | copy number gain | OCD109-1648 | SNP array | Genotyping | 27 |
| nssv15682088 | copy number gain | 218112 | SNP array | Genotyping | 38 |
| nssv15687924 | copy number gain | OCD53-S_0625-8346-2 | SNP array | Genotyping | 26 |
| nssv15688875 | copy number gain | 222691 | SNP array | Genotyping | 27 |
| nssv15690814 | copy number gain | OCD17-S_896321 | SNP array | Genotyping | 22 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15618877 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15637702 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15656690 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15668522 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15673246 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15674867 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15675789 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15676171 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15677422 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15677762 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15678817 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15679231 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15679400 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15679600 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15680315 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15681093 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15681835 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15682088 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15687924 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15688875 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15690814 | Remapped | Good | NC_000014.9:g.(?_2 1951951)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,951,951 | 22,505,293 |
| nssv15618877 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15637702 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15656690 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15668522 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15673246 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15674867 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15675789 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15676171 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15677422 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15677762 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15678817 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15679231 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15679400 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15679600 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15680315 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15681093 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15681835 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15682088 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15687924 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15688875 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 | ||
| nssv15690814 | Submitted genomic | NC_000014.8:g.(?_2 2420174)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,420,174 | 22,974,280 |