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dbVar

Database of genomic structural variation

nsv4367860

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:46,641

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 245 SVs from 47 studies. See in: genome view

Remapped(Score: Good):41,755,228-41,801,868

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4367860	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	41,755,228	41,801,868
nsv4367860	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	42,259,136	42,305,800

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15612227	copy number gain	1-0667-003	SNP array	Genotyping	20
nssv15612483	copy number gain	1-0673-003	SNP array	Genotyping	24
nssv15615053	copy number gain	1-0139-001	SNP array	Genotyping	17
nssv15616028	copy number gain	1-0139-005	SNP array	Genotyping	16
nssv15642013	copy number gain	15-1127-004	SNP array	Genotyping	32
nssv15679418	copy number gain	222680	SNP array	Genotyping	18

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15612227	Remapped	Good	NC_000019.10:g.(?_ 41755228)_(4180186 8_?)dup	GRCh38.p12	First Pass	NC_000019.10	Chr19	41,755,228	41,801,868
nssv15612483	Remapped	Good	NC_000019.10:g.(?_ 41755228)_(4180186 8_?)dup	GRCh38.p12	First Pass	NC_000019.10	Chr19	41,755,228	41,801,868
nssv15615053	Remapped	Good	NC_000019.10:g.(?_ 41755228)_(4180186 8_?)dup	GRCh38.p12	First Pass	NC_000019.10	Chr19	41,755,228	41,801,868
nssv15616028	Remapped	Good	NC_000019.10:g.(?_ 41755228)_(4180186 8_?)dup	GRCh38.p12	First Pass	NC_000019.10	Chr19	41,755,228	41,801,868
nssv15642013	Remapped	Good	NC_000019.10:g.(?_ 41755228)_(4180186 8_?)dup	GRCh38.p12	First Pass	NC_000019.10	Chr19	41,755,228	41,801,868
nssv15679418	Remapped	Good	NC_000019.10:g.(?_ 41755228)_(4180186 8_?)dup	GRCh38.p12	First Pass	NC_000019.10	Chr19	41,755,228	41,801,868
nssv15612227	Submitted genomic		NC_000019.9:g.(?_4 2259136)_(42305800 _?)dup	GRCh37 (hg19)		NC_000019.9	Chr19	42,259,136	42,305,800
nssv15612483	Submitted genomic		NC_000019.9:g.(?_4 2259136)_(42305800 _?)dup	GRCh37 (hg19)		NC_000019.9	Chr19	42,259,136	42,305,800
nssv15615053	Submitted genomic		NC_000019.9:g.(?_4 2259136)_(42305800 _?)dup	GRCh37 (hg19)		NC_000019.9	Chr19	42,259,136	42,305,800
nssv15616028	Submitted genomic		NC_000019.9:g.(?_4 2259136)_(42305800 _?)dup	GRCh37 (hg19)		NC_000019.9	Chr19	42,259,136	42,305,800
nssv15642013	Submitted genomic		NC_000019.9:g.(?_4 2259136)_(42305800 _?)dup	GRCh37 (hg19)		NC_000019.9	Chr19	42,259,136	42,305,800
nssv15679418	Submitted genomic		NC_000019.9:g.(?_4 2259136)_(42305800 _?)dup	GRCh37 (hg19)		NC_000019.9	Chr19	42,259,136	42,305,800

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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