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dbVar

Database of genomic structural variation

nsv4369026

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:85,936

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 813 SVs from 97 studies. See in: genome view

Remapped(Score: Perfect):38,252,947-38,338,882

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4369026	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	38,252,947	38,338,882
nsv4369026	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	38,292,548	38,378,483

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15619504	copy number gain	1-0181-004	SNP array	Genotyping	22
nssv15686632	copy number gain	OCD152-CM-1337(188601)	SNP array	Genotyping	21
nssv15686888	copy number gain	OCD36-S_0625-0144-3	SNP array	Genotyping	17
nssv15690906	copy number gain	OCD171-RS-1772	SNP array	Genotyping	14

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15619504	Remapped	Perfect	NC_000007.14:g.(?_ 38252947)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,252,947	38,338,882
nssv15686632	Remapped	Perfect	NC_000007.14:g.(?_ 38252947)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,252,947	38,338,882
nssv15686888	Remapped	Perfect	NC_000007.14:g.(?_ 38252947)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,252,947	38,338,882
nssv15690906	Remapped	Perfect	NC_000007.14:g.(?_ 38252947)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,252,947	38,338,882
nssv15619504	Submitted genomic		NC_000007.13:g.(?_ 38292548)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,292,548	38,378,483
nssv15686632	Submitted genomic		NC_000007.13:g.(?_ 38292548)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,292,548	38,378,483
nssv15686888	Submitted genomic		NC_000007.13:g.(?_ 38292548)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,292,548	38,378,483
nssv15690906	Submitted genomic		NC_000007.13:g.(?_ 38292548)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,292,548	38,378,483

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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