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dbVar

Database of genomic structural variation

nsv4370984

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:41,005

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1216 SVs from 84 studies. See in: genome view

Remapped(Score: Perfect):253,919-294,923

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4370984	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	253,919	294,923
nsv4370984	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	253,919	294,923

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15632970	copy number loss	10-1076-005	SNP array	Genotyping	21
nssv15687426	copy number loss	OCD49-0625-7114-2	SNP array	Genotyping	24

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15632970	Remapped	Perfect	NC_000006.12:g.(?_ 253919)_(294923_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	253,919	294,923
nssv15687426	Remapped	Perfect	NC_000006.12:g.(?_ 253919)_(294923_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	253,919	294,923
nssv15632970	Submitted genomic		NC_000006.11:g.(?_ 253919)_(294923_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	253,919	294,923
nssv15687426	Submitted genomic		NC_000006.11:g.(?_ 253919)_(294923_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	253,919	294,923

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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