nsv4371086

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:24
Validation:Not tested
Clinical Assertions: No
Region Size:111,135

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1103 SVs from 102 studies. See in: genome view

Remapped(Score: Perfect):38,254,349-38,365,483

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4371086	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nsv4371086	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	38,293,950	38,405,084

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15614642	copy number gain	1-0735-003	SNP array	Genotyping	29
nssv15618785	copy number gain	1-0887-003	SNP array	Genotyping	23
nssv15619003	copy number gain	1-0171-005	SNP array	Genotyping	28
nssv15623671	copy number gain	1-0271-002	SNP array	Genotyping	37
nssv15628003	copy number gain	1-0517-003	SNP array	Genotyping	23
nssv15633222	copy number gain	11-0013-003	SNP array	Genotyping	24
nssv15637017	copy number gain	14-0020-004	SNP array	Genotyping	34
nssv15637034	copy number gain	14-0024-003	SNP array	Genotyping	23
nssv15637256	copy number gain	12-8115-002	SNP array	Genotyping	18
nssv15639505	copy number gain	14-0231-001	SNP array	Genotyping	25
nssv15639855	copy number gain	14-0227-003	SNP array	Genotyping	28
nssv15641833	copy number gain	14-0276-003	SNP array	Genotyping	15
nssv15651848	copy number gain	2-1577-002	SNP array	Genotyping	23
nssv15652343	copy number gain	2-1502-002	SNP array	Genotyping	22
nssv15666877	copy number gain	7-0117-003	SNP array	Genotyping	29
nssv15673636	copy number gain	186278	SNP array	Genotyping	20
nssv15675142	copy number gain	222671	SNP array	Genotyping	30
nssv15676618	copy number gain	232716S	SNP array	Genotyping	21
nssv15678005	copy number gain	240256S	SNP array	Genotyping	19
nssv15678032	copy number gain	241962S	SNP array	Genotyping	24
nssv15678143	copy number gain	245251S	SNP array	Genotyping	22
nssv15680260	copy number gain	222688	SNP array	Genotyping	20
nssv15681682	copy number gain	214416S	SNP array	Genotyping	21
nssv15698744	copy number gain	243953S	SNP array	Genotyping	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15614642	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15618785	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15619003	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15623671	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15628003	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15633222	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15637017	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15637034	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15637256	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15639505	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15639855	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15641833	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15651848	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15652343	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15666877	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15673636	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15675142	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15676618	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15678005	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15678032	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15678143	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15680260	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15681682	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15698744	Remapped	Perfect	NC_000007.14:g.(?_ 38254349)_(3836548 3_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,254,349	38,365,483
nssv15614642	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15618785	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15619003	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15623671	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15628003	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15633222	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15637017	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15637034	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15637256	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15639505	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15639855	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15641833	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15651848	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15652343	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15666877	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15673636	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15675142	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15676618	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15678005	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15678032	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15678143	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15680260	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15681682	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084
nssv15698744	Submitted genomic		NC_000007.13:g.(?_ 38293950)_(3840508 4_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,293,950	38,405,084

dbVar

Database of genomic structural variation

nsv4371086

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant