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dbVar

Database of genomic structural variation

nsv4371992

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:1,499,059

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 7549 SVs from 113 studies. See in: genome view

Remapped(Score: Pass):32,499,858-33,998,916

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4371992	Remapped	Pass	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	32,499,858	33,998,916
nsv4371992	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	32,511,179	33,801,383

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15633100	copy number loss	10-1118-001	SNP array	Genotyping	17
nssv15637874	copy number loss	14-0025-002	SNP array	Genotyping	24

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15633100	Remapped	Pass	NC_000016.10:g.(?_ 32499858)_(3399891 6_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,499,858	33,998,916
nssv15637874	Remapped	Pass	NC_000016.10:g.(?_ 32499858)_(3399891 6_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,499,858	33,998,916
nssv15633100	Submitted genomic		NC_000016.9:g.(?_3 2511179)_(33801383 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	32,511,179	33,801,383
nssv15637874	Submitted genomic		NC_000016.9:g.(?_3 2511179)_(33801383 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	32,511,179	33,801,383

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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