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dbVar

Database of genomic structural variation

nsv4372305

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:7
Validation:Not tested
Clinical Assertions: No
Region Size:148,684

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 444 SVs from 53 studies. See in: genome view

Remapped(Score: Perfect):35,759,275-35,907,958

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4372305	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	35,759,275	35,907,958
nsv4372305	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	35,800,767	35,949,450

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15634442	copy number gain	11-0041-003	SNP array	Genotyping	19
nssv15636453	copy number gain	13-0053-002	SNP array	Genotyping	20
nssv15639037	copy number gain	14-0246-001	SNP array	Genotyping	22
nssv15639084	copy number gain	14-0246-004	SNP array	Genotyping	24
nssv15641696	copy number gain	14-0246-003	SNP array	Genotyping	25
nssv15649728	copy number gain	2-1334-001	SNP array	Genotyping	19
nssv15649820	copy number gain	2-1355-003	SNP array	Genotyping	14

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15634442	Remapped	Perfect	NC_000003.12:g.(?_ 35759275)_(3590795 8_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	35,759,275	35,907,958
nssv15636453	Remapped	Perfect	NC_000003.12:g.(?_ 35759275)_(3590795 8_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	35,759,275	35,907,958
nssv15639037	Remapped	Perfect	NC_000003.12:g.(?_ 35759275)_(3590795 8_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	35,759,275	35,907,958
nssv15639084	Remapped	Perfect	NC_000003.12:g.(?_ 35759275)_(3590795 8_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	35,759,275	35,907,958
nssv15641696	Remapped	Perfect	NC_000003.12:g.(?_ 35759275)_(3590795 8_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	35,759,275	35,907,958
nssv15649728	Remapped	Perfect	NC_000003.12:g.(?_ 35759275)_(3590795 8_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	35,759,275	35,907,958
nssv15649820	Remapped	Perfect	NC_000003.12:g.(?_ 35759275)_(3590795 8_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	35,759,275	35,907,958
nssv15634442	Submitted genomic		NC_000003.11:g.(?_ 35800767)_(3594945 0_?)dup	GRCh37 (hg19)		NC_000003.11	Chr3	35,800,767	35,949,450
nssv15636453	Submitted genomic		NC_000003.11:g.(?_ 35800767)_(3594945 0_?)dup	GRCh37 (hg19)		NC_000003.11	Chr3	35,800,767	35,949,450
nssv15639037	Submitted genomic		NC_000003.11:g.(?_ 35800767)_(3594945 0_?)dup	GRCh37 (hg19)		NC_000003.11	Chr3	35,800,767	35,949,450
nssv15639084	Submitted genomic		NC_000003.11:g.(?_ 35800767)_(3594945 0_?)dup	GRCh37 (hg19)		NC_000003.11	Chr3	35,800,767	35,949,450
nssv15641696	Submitted genomic		NC_000003.11:g.(?_ 35800767)_(3594945 0_?)dup	GRCh37 (hg19)		NC_000003.11	Chr3	35,800,767	35,949,450
nssv15649728	Submitted genomic		NC_000003.11:g.(?_ 35800767)_(3594945 0_?)dup	GRCh37 (hg19)		NC_000003.11	Chr3	35,800,767	35,949,450
nssv15649820	Submitted genomic		NC_000003.11:g.(?_ 35800767)_(3594945 0_?)dup	GRCh37 (hg19)		NC_000003.11	Chr3	35,800,767	35,949,450

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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