Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv4373170

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:161,498

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1478 SVs from 105 studies. See in: genome view

Remapped(Score: Perfect):135,255,936-135,417,433

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4373170	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000009.12	Chr9	135,255,936	135,417,433
nsv4373170	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000009.11	Chr9	138,147,782	138,309,279

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15615314	copy number gain	1-0767-003	SNP array	Genotyping	20
nssv15673732	copy number gain	227575	SNP array	Genotyping	20
nssv15685271	copy number gain	OCD1163-0625-7948-3	SNP array	Genotyping	26
nssv15691663	copy number gain	OCD74-VM-1474	SNP array	Genotyping	12

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15615314	Remapped	Perfect	NC_000009.12:g.(?_ 135255936)_(135417 433_?)dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	135,255,936	135,417,433
nssv15673732	Remapped	Perfect	NC_000009.12:g.(?_ 135255936)_(135417 433_?)dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	135,255,936	135,417,433
nssv15685271	Remapped	Perfect	NC_000009.12:g.(?_ 135255936)_(135417 433_?)dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	135,255,936	135,417,433
nssv15691663	Remapped	Perfect	NC_000009.12:g.(?_ 135255936)_(135417 433_?)dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	135,255,936	135,417,433
nssv15615314	Submitted genomic		NC_000009.11:g.(?_ 138147782)_(138309 279_?)dup	GRCh37 (hg19)		NC_000009.11	Chr9	138,147,782	138,309,279
nssv15673732	Submitted genomic		NC_000009.11:g.(?_ 138147782)_(138309 279_?)dup	GRCh37 (hg19)		NC_000009.11	Chr9	138,147,782	138,309,279
nssv15685271	Submitted genomic		NC_000009.11:g.(?_ 138147782)_(138309 279_?)dup	GRCh37 (hg19)		NC_000009.11	Chr9	138,147,782	138,309,279
nssv15691663	Submitted genomic		NC_000009.11:g.(?_ 138147782)_(138309 279_?)dup	GRCh37 (hg19)		NC_000009.11	Chr9	138,147,782	138,309,279

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI