nsv4375900
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:25
- Validation:Not tested
- Clinical Assertions: No
- Region Size:493,209
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2802 SVs from 96 studies. See in: genome view
Overlapping variant regions from other studies: 2937 SVs from 102 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4375900 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nsv4375900 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15618230 | copy number gain | 1-0860-003 | SNP array | Genotyping | 31 |
| nssv15628973 | copy number gain | 1-0546-002 | SNP array | Genotyping | 22 |
| nssv15634103 | copy number gain | 11-0024-003 | SNP array | Genotyping | 25 |
| nssv15638273 | copy number gain | 14-0056-002 | SNP array | Genotyping | 23 |
| nssv15657293 | copy number gain | 3-0376-000 | SNP array | Genotyping | 17 |
| nssv15662819 | copy number gain | 5-0139-001 | SNP array | Genotyping | 30 |
| nssv15672065 | copy number gain | 9-0013-001 | SNP array | Genotyping | 19 |
| nssv15674177 | copy number gain | 9-0021-003 | SNP array | Genotyping | 18 |
| nssv15674259 | copy number gain | 9-0024-001 | SNP array | Genotyping | 21 |
| nssv15674671 | copy number gain | 222704 | SNP array | Genotyping | 20 |
| nssv15674846 | copy number gain | 209356 | SNP array | Genotyping | 25 |
| nssv15679431 | copy number gain | 223295 | SNP array | Genotyping | 21 |
| nssv15685627 | copy number gain | OCD168-8961233 | SNP array | Genotyping | 19 |
| nssv15686323 | copy number gain | OCD31-S_896572 | SNP array | Genotyping | 28 |
| nssv15687668 | copy number gain | OCD172-SW-1812 | SNP array | Genotyping | 17 |
| nssv15687801 | copy number gain | OCD5-S_896112 | SNP array | Genotyping | 21 |
| nssv15688956 | copy number gain | 225334 | SNP array | Genotyping | 19 |
| nssv15690899 | copy number gain | OCD171-RS-1772 | SNP array | Genotyping | 14 |
| nssv15691394 | copy number gain | OCD42-S_0625-2765-1 | SNP array | Genotyping | 28 |
| nssv15693034 | copy number gain | OCD81-896771 | SNP array | Genotyping | 20 |
| nssv15695225 | copy number gain | 159783 | SNP array | Genotyping | 25 |
| nssv15695440 | copy number gain | 161744 | SNP array | Genotyping | 17 |
| nssv15696667 | copy number gain | 173088 | SNP array | Genotyping | 22 |
| nssv15698582 | copy number gain | 159367 | SNP array | Genotyping | 23 |
| nssv15699977 | copy number gain | 180694 | SNP array | Genotyping | 19 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15618230 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15628973 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15634103 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15638273 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15657293 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15662819 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15672065 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15674177 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15674259 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15674671 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15674846 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15679431 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15685627 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15686323 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15687668 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15687801 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15688956 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15690899 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15691394 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15693034 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15695225 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15695440 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15696667 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15698582 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15699977 | Remapped | Good | NC_000014.9:g.(?_2 2012085)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 22,012,085 | 22,505,293 |
| nssv15618230 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15628973 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15634103 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15638273 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15657293 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15662819 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15672065 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15674177 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15674259 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15674671 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15674846 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15679431 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15685627 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15686323 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15687668 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15687801 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15688956 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15690899 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15691394 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15693034 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15695225 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15695440 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15696667 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15698582 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 | ||
| nssv15699977 | Submitted genomic | NC_000014.8:g.(?_2 2480324)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,480,324 | 22,974,280 |