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dbVar

Database of genomic structural variation

nsv4377054

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:95,045

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 3024 SVs from 114 studies. See in: genome view

Remapped(Score: Perfect):29,873,244-29,968,288

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4377054	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	29,873,244	29,968,288
nsv4377054	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	29,841,021	29,936,065

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15613479	copy number loss	1-0684-003	SNP array	Genotyping	21
nssv15674856	copy number loss	209356	SNP array	Genotyping	25

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15613479	Remapped	Perfect	NC_000006.12:g.(?_ 29873244)_(2996828 8_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	29,873,244	29,968,288
nssv15674856	Remapped	Perfect	NC_000006.12:g.(?_ 29873244)_(2996828 8_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	29,873,244	29,968,288
nssv15613479	Submitted genomic		NC_000006.11:g.(?_ 29841021)_(2993606 5_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	29,841,021	29,936,065
nssv15674856	Submitted genomic		NC_000006.11:g.(?_ 29841021)_(2993606 5_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	29,841,021	29,936,065

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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