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dbVar

Database of genomic structural variation

nsv4377255

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:39,920

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 360 SVs from 77 studies. See in: genome view

Remapped(Score: Perfect):59,047,641-59,087,560

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4377255	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	59,047,641	59,087,560
nsv4377255	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	58,815,114	58,855,033

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15629615	copy number gain	1-0583-003	SNP array	Genotyping	23
nssv15665450	copy number gain	7-0061-003	SNP array	Genotyping	32

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15629615	Remapped	Perfect	NC_000011.10:g.(?_ 59047641)_(5908756 0_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	59,047,641	59,087,560
nssv15665450	Remapped	Perfect	NC_000011.10:g.(?_ 59047641)_(5908756 0_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	59,047,641	59,087,560
nssv15629615	Submitted genomic		NC_000011.9:g.(?_5 8815114)_(58855033 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	58,815,114	58,855,033
nssv15665450	Submitted genomic		NC_000011.9:g.(?_5 8815114)_(58855033 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	58,815,114	58,855,033

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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