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nsv437963

  • Variant Calls:2
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:2,658

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 454 SVs from 68 studies. See in: genome view    
Remapped(Score: Good):29,958,820-29,961,476Question Mark
Overlapping variant regions from other studies: 129 SVs from 24 studies. See in: genome view    
Remapped(Score: Perfect):1,302,874-1,305,531Question Mark
Overlapping variant regions from other studies: 18 SVs from 9 studies. See in: genome view    
Remapped(Score: Perfect):1,213,803-1,216,460Question Mark
Overlapping variant regions from other studies: 18 SVs from 9 studies. See in: genome view    
Remapped(Score: Perfect):1,256,629-1,259,286Question Mark
Overlapping variant regions from other studies: 152 SVs from 30 studies. See in: genome view    
Remapped(Score: Perfect):1,219,570-1,222,227Question Mark
Overlapping variant regions from other studies: 18 SVs from 9 studies. See in: genome view    
Remapped(Score: Perfect):1,214,360-1,217,017Question Mark
Overlapping variant regions from other studies: 18 SVs from 9 studies. See in: genome view    
Remapped(Score: Perfect):1,438,208-1,440,865Question Mark
Overlapping variant regions from other studies: 18 SVs from 9 studies. See in: genome view    
Remapped(Score: Perfect):1,216,533-1,219,190Question Mark
Overlapping variant regions from other studies: 454 SVs from 68 studies. See in: genome view    
Remapped(Score: Good):29,926,597-29,929,253Question Mark
Overlapping variant regions from other studies: 18 SVs from 9 studies. See in: genome view    
Remapped(Score: Perfect):1,438,314-1,440,971Question Mark
Overlapping variant regions from other studies: 19 SVs from 10 studies. See in: genome view    
Remapped(Score: Perfect):1,219,945-1,222,602Question Mark
Overlapping variant regions from other studies: 129 SVs from 24 studies. See in: genome view    
Remapped(Score: Perfect):1,308,459-1,311,116Question Mark
Overlapping variant regions from other studies: 18 SVs from 9 studies. See in: genome view    
Remapped(Score: Perfect):1,219,399-1,222,056Question Mark
Overlapping variant regions from other studies: 18 SVs from 9 studies. See in: genome view    
Remapped(Score: Perfect):1,255,927-1,258,584Question Mark
Overlapping variant regions from other studies: 18 SVs from 9 studies. See in: genome view    
Remapped(Score: Perfect):1,166,449-1,169,106Question Mark
Overlapping variant regions from other studies: 152 SVs from 30 studies. See in: genome view    
Remapped(Score: Perfect):1,225,190-1,227,847Question Mark
Overlapping variant regions from other studies: 18 SVs from 9 studies. See in: genome view    
Remapped(Score: Perfect):192,710-195,367Question Mark
Overlapping variant regions from other studies: 1 SVs from 1 studies. See in: genome view    
Submitted genomic30,032,433-30,035,090Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv437963RemappedGoodGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr629,958,82029,961,476
nsv437963RemappedPerfectGRCh38.p12ALT_REF_LOCI_5Second PassNT_167247.2Chr6|NT_16
7247.2		1,302,8741,305,531
nsv437963RemappedPerfectGRCh38.p12ALT_REF_LOCI_6Second PassNT_167248.2Chr6|NT_16
7248.2		1,213,8031,216,460
nsv437963RemappedPerfectGRCh38.p12ALT_REF_LOCI_7Second PassNT_167249.2Chr6|NT_16
7249.2		1,256,6291,259,286
nsv437963RemappedPerfectGRCh38.p12ALT_REF_LOCI_4Second PassNT_167246.2Chr6|NT_16
7246.2		1,219,5701,222,227
nsv437963RemappedPerfectGRCh38.p12ALT_REF_LOCI_3Second PassNT_167245.2Chr6|NT_16
7245.2		1,214,3601,217,017
nsv437963RemappedPerfectGRCh38.p12ALT_REF_LOCI_2Second PassNT_113891.3Chr6|NT_11
3891.3		1,438,2081,440,865
nsv437963RemappedPerfectGRCh38.p12ALT_REF_LOCI_1Second PassNT_167244.2Chr6|NT_16
7244.2		1,216,5331,219,190
nsv437963RemappedGoodGRCh37.p13Primary AssemblySecond PassNC_000006.11Chr629,926,59729,929,253
nsv437963RemappedPerfectGRCh37.p13ALT_REF_LOCI_2Second PassNT_113891.2Chr6|NT_11
3891.2		1,438,3141,440,971
nsv437963RemappedPerfectGRCh37.p13ALT_REF_LOCI_3Second PassNT_167245.1Chr6|NT_16
7245.1		1,219,9451,222,602
nsv437963RemappedPerfectGRCh37.p13ALT_REF_LOCI_5Second PassNT_167247.1Chr6|NT_16
7247.1		1,308,4591,311,116
nsv437963RemappedPerfectGRCh37.p13ALT_REF_LOCI_6Second PassNT_167248.1Chr6|NT_16
7248.1		1,219,3991,222,056
nsv437963RemappedPerfectGRCh37.p13ALT_REF_LOCI_7Second PassNT_167249.1Chr6|NT_16
7249.1		1,255,9271,258,584
nsv437963RemappedPerfectGRCh37.p13ALT_REF_LOCI_1Second PassNT_167244.1Chr6|NT_16
7244.1		1,166,4491,169,106
nsv437963RemappedPerfectGRCh37.p13ALT_REF_LOCI_4Second PassNT_167246.1Chr6|NT_16
7246.1		1,225,1901,227,847
nsv437963RemappedPerfectGRCh37.p13PATCHESFirst PassNW_003871063.1Chr6|NW_00
3871063.1		192,710195,367
nsv437963Submitted genomicNCBI34 (hg16)Primary AssemblyNC_000006.8Chr630,032,43330,035,090

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv468735copy number lossNA19131SNP arraySNP genotyping analysis16
nssv468736copy number lossNA19132SNP arraySNP genotyping analysis24

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv468735RemappedPerfectNT_167248.2:g.(?_1
213803)_(1216460_?
)del		GRCh38.p12Second PassNT_167248.2Chr6|NT_16
7248.2		1,213,8031,216,460
nssv468736RemappedPerfectNT_167248.2:g.(?_1
213803)_(1216460_?
)del		GRCh38.p12Second PassNT_167248.2Chr6|NT_16
7248.2		1,213,8031,216,460
nssv468735RemappedPerfectNT_167246.2:g.(?_1
219570)_(1222227_?
)del		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		1,219,5701,222,227
nssv468736RemappedPerfectNT_167246.2:g.(?_1
219570)_(1222227_?
)del		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		1,219,5701,222,227
nssv468735RemappedPerfectNT_167249.2:g.(?_1
256629)_(1259286_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		1,256,6291,259,286
nssv468736RemappedPerfectNT_167249.2:g.(?_1
256629)_(1259286_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		1,256,6291,259,286
nssv468735RemappedPerfectNT_167247.2:g.(?_1
302874)_(1305531_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		1,302,8741,305,531
nssv468736RemappedPerfectNT_167247.2:g.(?_1
302874)_(1305531_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		1,302,8741,305,531
nssv468735RemappedPerfectNT_167245.2:g.(?_1
214360)_(1217017_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		1,214,3601,217,017
nssv468736RemappedPerfectNT_167245.2:g.(?_1
214360)_(1217017_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		1,214,3601,217,017
nssv468735RemappedPerfectNT_167244.2:g.(?_1
216533)_(1219190_?
)del		GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2		1,216,5331,219,190
nssv468736RemappedPerfectNT_167244.2:g.(?_1
216533)_(1219190_?
)del		GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2		1,216,5331,219,190
nssv468735RemappedPerfectNT_113891.3:g.(?_1
438208)_(1440865_?
)del		GRCh38.p12Second PassNT_113891.3Chr6|NT_11
3891.3		1,438,2081,440,865
nssv468736RemappedPerfectNT_113891.3:g.(?_1
438208)_(1440865_?
)del		GRCh38.p12Second PassNT_113891.3Chr6|NT_11
3891.3		1,438,2081,440,865
nssv468735RemappedGoodNC_000006.12:g.(?_
29958820)_(2996147
6_?)del		GRCh38.p12First PassNC_000006.12Chr629,958,82029,961,476
nssv468736RemappedGoodNC_000006.12:g.(?_
29958820)_(2996147
6_?)del		GRCh38.p12First PassNC_000006.12Chr629,958,82029,961,476
nssv468735RemappedPerfectNW_003871063.1:g.(
?_192710)_(195367_
?)del		GRCh37.p13First PassNW_003871063.1Chr6|NW_00
3871063.1		192,710195,367
nssv468736RemappedPerfectNW_003871063.1:g.(
?_192710)_(195367_
?)del		GRCh37.p13First PassNW_003871063.1Chr6|NW_00
3871063.1		192,710195,367
nssv468735RemappedPerfectNT_167244.1:g.(?_1
166449)_(1169106_?
)del		GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1		1,166,4491,169,106
nssv468736RemappedPerfectNT_167244.1:g.(?_1
166449)_(1169106_?
)del		GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1		1,166,4491,169,106
nssv468735RemappedPerfectNT_167248.1:g.(?_1
219399)_(1222056_?
)delNT_167248.1:g.
(?_1219399)_(12220
56_?)del		GRCh37.p13Second PassNT_167248.1Chr6|NT_16
7248.1		1,219,3991,222,056
nssv468736RemappedPerfectNT_167248.1:g.(?_1
219399)_(1222056_?
)delNT_167248.1:g.
(?_1219399)_(12220
56_?)del		GRCh37.p13Second PassNT_167248.1Chr6|NT_16
7248.1		1,219,3991,222,056
nssv468735RemappedPerfectNT_167245.1:g.(?_1
219945)_(1222602_?
)delNT_167245.1:g.
(?_1219945)_(12226
02_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		1,219,9451,222,602
nssv468736RemappedPerfectNT_167245.1:g.(?_1
219945)_(1222602_?
)delNT_167245.1:g.
(?_1219945)_(12226
02_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		1,219,9451,222,602
nssv468735RemappedPerfectNT_167246.1:g.(?_1
225190)_(1227847_?
)delNT_167246.1:g.
(?_1225190)_(12278
47_?)del		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		1,225,1901,227,847
nssv468736RemappedPerfectNT_167246.1:g.(?_1
225190)_(1227847_?
)delNT_167246.1:g.
(?_1225190)_(12278
47_?)del		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		1,225,1901,227,847
nssv468735RemappedPerfectNT_167249.1:g.(?_1
255927)_(1258584_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		1,255,9271,258,584
nssv468736RemappedPerfectNT_167249.1:g.(?_1
255927)_(1258584_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		1,255,9271,258,584
nssv468735RemappedPerfectNT_167247.1:g.(?_1
308459)_(1311116_?
)delNT_167247.1:g.
(?_1308459)_(13111
16_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		1,308,4591,311,116
nssv468736RemappedPerfectNT_167247.1:g.(?_1
308459)_(1311116_?
)delNT_167247.1:g.
(?_1308459)_(13111
16_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		1,308,4591,311,116
nssv468735RemappedPerfectNT_113891.2:g.(?_1
438314)_(1440971_?
)del		GRCh37.p13Second PassNT_113891.2Chr6|NT_11
3891.2		1,438,3141,440,971
nssv468736RemappedPerfectNT_113891.2:g.(?_1
438314)_(1440971_?
)del		GRCh37.p13Second PassNT_113891.2Chr6|NT_11
3891.2		1,438,3141,440,971
nssv468735RemappedGoodNC_000006.11:g.(?_
29926597)_(2992925
3_?)del		GRCh37.p13Second PassNC_000006.11Chr629,926,59729,929,253
nssv468736RemappedGoodNC_000006.11:g.(?_
29926597)_(2992925
3_?)del		GRCh37.p13Second PassNC_000006.11Chr629,926,59729,929,253
nssv468735Submitted genomicNC_000006.8:g.(?_3
0032433)_(30035090
_?)del		NCBI34 (hg16)NC_000006.8Chr630,032,43330,035,090
nssv468736Submitted genomicNC_000006.8:g.(?_3
0032433)_(30035090
_?)del		NCBI34 (hg16)NC_000006.8Chr630,032,43330,035,090

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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