nsv4380476

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:13
Validation:Not tested
Clinical Assertions: No
Region Size:86,609

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 835 SVs from 96 studies. See in: genome view

Remapped(Score: Perfect):38,256,331-38,342,939

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4380476	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nsv4380476	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	38,295,932	38,382,540

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15617521	copy number gain	1-0153-001	SNP array	Genotyping	21
nssv15642754	copy number gain	14-0358-004	SNP array	Genotyping	28
nssv15642970	copy number gain	15-1131-001	SNP array	Genotyping	19
nssv15653388	copy number gain	2-1730-003	SNP array	Genotyping	23
nssv15654672	copy number gain	3-0184-000	SNP array	Genotyping	23
nssv15654711	copy number gain	3-0193-000	SNP array	Genotyping	19
nssv15660767	copy number gain	5-0065-001	SNP array	Genotyping	20
nssv15685974	copy number gain	OCD173-WH-1775	SNP array	Genotyping	13
nssv15688158	copy number gain	209354	SNP array	Genotyping	18
nssv15688792	copy number gain	OCD47-S_0625-5986-1	SNP array	Genotyping	15
nssv15689369	copy number gain	OCD100-1571	SNP array	Genotyping	23
nssv15691089	copy number gain	OCD25-S_896502	SNP array	Genotyping	13
nssv15693932	copy number gain	OCD97-1399-2	SNP array	Genotyping	15

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15617521	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15642754	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15642970	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15653388	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15654672	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15654711	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15660767	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15685974	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15688158	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15688792	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15689369	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15691089	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15693932	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3834293 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,342,939
nssv15617521	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15642754	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15642970	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15653388	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15654672	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15654711	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15660767	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15685974	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15688158	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15688792	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15689369	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15691089	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540
nssv15693932	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3838254 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,382,540

dbVar

Database of genomic structural variation

nsv4380476

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant