nsv4381537

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:40
Validation:Not tested
Clinical Assertions: No
Region Size:28,781

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 901 SVs from 85 studies. See in: genome view

Remapped(Score: Perfect):73,534,418-73,563,198

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4381537	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nsv4381537	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000014.8	Chr14	74,001,122	74,029,902

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15615558	copy number loss	1-0796-003	SNP array	Genotyping	20
nssv15615713	copy number loss	1-0779-003	SNP array	Genotyping	25
nssv15615928	copy number loss	1-0805-003	SNP array	Genotyping	19
nssv15631716	copy number loss	10-0014-002	SNP array	Genotyping	26
nssv15631795	copy number loss	10-0015-003	SNP array	Genotyping	20
nssv15635195	copy number loss	13-0031-004	SNP array	Genotyping	19
nssv15640494	copy number loss	14-0332-001	SNP array	Genotyping	26
nssv15642581	copy number loss	15-1132-003	SNP array	Genotyping	21
nssv15643704	copy number loss	2-0122-002	SNP array	Genotyping	19
nssv15645093	copy number gain	2-0323-003	SNP array	Genotyping	16
nssv15646778	copy number loss	2-1085-004	SNP array	Genotyping	20
nssv15646831	copy number loss	2-1089-002	SNP array	Genotyping	22
nssv15650976	copy number loss	2-1428-002	SNP array	Genotyping	32
nssv15652066	copy number loss	2-1512-003	SNP array	Genotyping	19
nssv15655609	copy number loss	3-0498-000	SNP array	Genotyping	23
nssv15655827	copy number loss	2-1724-003	SNP array	Genotyping	25
nssv15656331	copy number loss	4-0026-004	SNP array	Genotyping	18
nssv15657381	copy number loss	3-0490-000	SNP array	Genotyping	24
nssv15659075	copy number loss	4-0061-003	SNP array	Genotyping	28
nssv15660842	copy number loss	4-0052-001	SNP array	Genotyping	20
nssv15660862	copy number loss	4-0052-003	SNP array	Genotyping	12
nssv15661804	copy number loss	4-0036-002	SNP array	Genotyping	19
nssv15662144	copy number loss	5-0118-001	SNP array	Genotyping	19
nssv15663553	copy number loss	5-0135-003	SNP array	Genotyping	24
nssv15666710	copy number loss	7-0107-003	SNP array	Genotyping	27
nssv15670710	copy number loss	7-0241-003	SNP array	Genotyping	21
nssv15671097	copy number loss	7-0300-003	SNP array	Genotyping	19
nssv15674617	copy number loss	9-0046-003	SNP array	Genotyping	21
nssv15675126	copy number loss	222671	SNP array	Genotyping	30
nssv15675647	copy number loss	9-0045-001	SNP array	Genotyping	21
nssv15675707	copy number loss	206767	SNP array	Genotyping	17
nssv15677605	copy number loss	215806	SNP array	Genotyping	23
nssv15677875	copy number loss	218116	SNP array	Genotyping	24
nssv15680738	copy number loss	216159	SNP array	Genotyping	22
nssv15682901	copy number loss	OCD12-S_896223	SNP array	Genotyping	21
nssv15685501	copy number loss	OCD127-896973	SNP array	Genotyping	31
nssv15688939	copy number loss	225325	SNP array	Genotyping	19
nssv15689793	copy number loss	OCD115-S_1690	SNP array	Genotyping	25
nssv15697670	copy number loss	197699	SNP array	Genotyping	20
nssv15701522	copy number loss	150519	SNP array	Genotyping	15

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15615558	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15615713	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15615928	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15631716	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15631795	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15635195	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15640494	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15642581	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15643704	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15645093	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15646778	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15646831	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15650976	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15652066	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15655609	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15655827	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15656331	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15657381	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15659075	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15660842	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15660862	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15661804	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15662144	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15663553	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15666710	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15670710	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15671097	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15674617	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15675126	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15675647	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15675707	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15677605	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15677875	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15680738	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15682901	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15685501	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15688939	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15689793	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15697670	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15701522	Remapped	Perfect	NC_000014.9:g.(?_7 3534418)_(73563198 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	73,534,418	73,563,198
nssv15615558	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15615713	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15615928	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15631716	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15631795	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15635195	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15640494	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15642581	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15643704	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15645093	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15646778	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15646831	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15650976	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15652066	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15655609	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15655827	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15656331	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15657381	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15659075	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15660842	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15660862	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15661804	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15662144	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15663553	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15666710	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15670710	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15671097	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15674617	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15675126	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15675647	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15675707	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15677605	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15677875	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15680738	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15682901	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15685501	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15688939	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15689793	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15697670	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902
nssv15701522	Submitted genomic		NC_000014.8:g.(?_7 4001122)_(74029902 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	74,001,122	74,029,902

dbVar

Database of genomic structural variation

nsv4381537

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant