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dbVar

Database of genomic structural variation

nsv4383009

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:34,738

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 231 SVs from 46 studies. See in: genome view

Remapped(Score: Perfect):21,241,494-21,276,231

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4383009	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	21,241,494	21,276,231
nsv4383009	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	21,424,296	21,459,033

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15652833	copy number loss	2-1548-003	SNP array	Genotyping	27
nssv15658438	copy number loss	4-0038-002	SNP array	Genotyping	32

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15652833	Remapped	Perfect	NC_000019.10:g.(?_ 21241494)_(2127623 1_?)del	GRCh38.p12	First Pass	NC_000019.10	Chr19	21,241,494	21,276,231
nssv15658438	Remapped	Perfect	NC_000019.10:g.(?_ 21241494)_(2127623 1_?)del	GRCh38.p12	First Pass	NC_000019.10	Chr19	21,241,494	21,276,231
nssv15652833	Submitted genomic		NC_000019.9:g.(?_2 1424296)_(21459033 _?)del	GRCh37 (hg19)		NC_000019.9	Chr19	21,424,296	21,459,033
nssv15658438	Submitted genomic		NC_000019.9:g.(?_2 1424296)_(21459033 _?)del	GRCh37 (hg19)		NC_000019.9	Chr19	21,424,296	21,459,033

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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