Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv4383665

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:9
Validation:Not tested
Clinical Assertions: No
Region Size:572,839

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2973 SVs from 96 studies. See in: genome view

Remapped(Score: Good):21,935,993-22,508,831

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4383665	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	21,935,993	22,508,831
nsv4383665	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000014.8	Chr14	22,404,167	22,977,816

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15620514	copy number gain	1-0942-003	SNP array	Genotyping	22
nssv15622290	copy number gain	1-0190-003	SNP array	Genotyping	18
nssv15634436	copy number gain	11-0041-003	SNP array	Genotyping	19
nssv15642424	copy number gain	15-1119-001	SNP array	Genotyping	26
nssv15666596	copy number gain	7-0124-003	SNP array	Genotyping	17
nssv15675536	copy number gain	160172	SNP array	Genotyping	14
nssv15675667	copy number gain	9-0045-002	SNP array	Genotyping	22
nssv15677298	copy number gain	237804S	SNP array	Genotyping	26
nssv15678070	copy number gain	242059S	SNP array	Genotyping	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15620514	Remapped	Good	NC_000014.9:g.(?_2 1935993)_(22508831 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	21,935,993	22,508,831
nssv15622290	Remapped	Good	NC_000014.9:g.(?_2 1935993)_(22508831 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	21,935,993	22,508,831
nssv15634436	Remapped	Good	NC_000014.9:g.(?_2 1935993)_(22508831 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	21,935,993	22,508,831
nssv15642424	Remapped	Good	NC_000014.9:g.(?_2 1935993)_(22508831 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	21,935,993	22,508,831
nssv15666596	Remapped	Good	NC_000014.9:g.(?_2 1935993)_(22508831 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	21,935,993	22,508,831
nssv15675536	Remapped	Good	NC_000014.9:g.(?_2 1935993)_(22508831 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	21,935,993	22,508,831
nssv15675667	Remapped	Good	NC_000014.9:g.(?_2 1935993)_(22508831 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	21,935,993	22,508,831
nssv15677298	Remapped	Good	NC_000014.9:g.(?_2 1935993)_(22508831 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	21,935,993	22,508,831
nssv15678070	Remapped	Good	NC_000014.9:g.(?_2 1935993)_(22508831 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	21,935,993	22,508,831
nssv15620514	Submitted genomic		NC_000014.8:g.(?_2 2404167)_(22977816 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,404,167	22,977,816
nssv15622290	Submitted genomic		NC_000014.8:g.(?_2 2404167)_(22977816 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,404,167	22,977,816
nssv15634436	Submitted genomic		NC_000014.8:g.(?_2 2404167)_(22977816 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,404,167	22,977,816
nssv15642424	Submitted genomic		NC_000014.8:g.(?_2 2404167)_(22977816 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,404,167	22,977,816
nssv15666596	Submitted genomic		NC_000014.8:g.(?_2 2404167)_(22977816 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,404,167	22,977,816
nssv15675536	Submitted genomic		NC_000014.8:g.(?_2 2404167)_(22977816 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,404,167	22,977,816
nssv15675667	Submitted genomic		NC_000014.8:g.(?_2 2404167)_(22977816 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,404,167	22,977,816
nssv15677298	Submitted genomic		NC_000014.8:g.(?_2 2404167)_(22977816 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,404,167	22,977,816
nssv15678070	Submitted genomic		NC_000014.8:g.(?_2 2404167)_(22977816 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,404,167	22,977,816

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI