nsv4384072

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:32
Validation:Not tested
Clinical Assertions: No
Region Size:55,892

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 710 SVs from 78 studies. See in: genome view

Remapped(Score: Perfect):180,947,898-181,003,789

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4384072	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nsv4384072	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	180,374,898	180,430,789

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15612578	copy number gain	1-0699-003	SNP array	Genotyping	19
nssv15614120	copy number gain	1-0731-002	SNP array	Genotyping	20
nssv15616688	copy number gain	1-0025-002	SNP array	Genotyping	30
nssv15619776	copy number gain	1-0907-003	SNP array	Genotyping	25
nssv15626942	copy number gain	1-0458-001	SNP array	Genotyping	20
nssv15627142	copy number gain	1-0459-004	SNP array	Genotyping	24
nssv15627414	copy number gain	1-0539-003	SNP array	Genotyping	16
nssv15628068	copy number gain	1-0059-002	SNP array	Genotyping	19
nssv15628379	copy number gain	1-0517-008	SNP array	Genotyping	19
nssv15628639	copy number gain	1-0538-004	SNP array	Genotyping	21
nssv15632777	copy number gain	10-0008-001	SNP array	Genotyping	27
nssv15639363	copy number gain	14-0179-004	SNP array	Genotyping	23
nssv15640364	copy number gain	14-0152-001	SNP array	Genotyping	22
nssv15642104	copy number gain	15-1130-003	SNP array	Genotyping	18
nssv15646152	copy number gain	16-1023-003	SNP array	Genotyping	26
nssv15654908	copy number gain	2-1631-001	SNP array	Genotyping	21
nssv15656514	copy number gain	2-1753-003	SNP array	Genotyping	19
nssv15657010	copy number gain	3-0706-000	SNP array	Genotyping	22
nssv15661232	copy number gain	5-0061-001	SNP array	Genotyping	21
nssv15663619	copy number gain	5-1005-003	SNP array	Genotyping	21
nssv15664092	copy number gain	231670	SNP array	Genotyping	14
nssv15668801	copy number gain	7-0228-003	SNP array	Genotyping	18
nssv15669471	copy number gain	7-0243-003	SNP array	Genotyping	24
nssv15672333	copy number gain	7-0312-003	SNP array	Genotyping	22
nssv15675555	copy number gain	169695	SNP array	Genotyping	14
nssv15677032	copy number gain	216467	SNP array	Genotyping	16
nssv15682653	copy number gain	OCD1126-B_1628	SNP array	Genotyping	13
nssv15686710	copy number gain	OCD24-S_896441	SNP array	Genotyping	21
nssv15689259	copy number gain	OCD1-B_LA-1326	SNP array	Genotyping	15
nssv15691504	copy number gain	OCD44-B_KH-1375	SNP array	Genotyping	19
nssv15698381	copy number gain	165194	SNP array	Genotyping	29
nssv15701440	copy number gain	180692	SNP array	Genotyping	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15612578	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15614120	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15616688	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15619776	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15626942	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15627142	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15627414	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15628068	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15628379	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15628639	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15632777	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15639363	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15640364	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15642104	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15646152	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15654908	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15656514	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15657010	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15661232	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15663619	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15664092	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15668801	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15669471	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15672333	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15675555	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15677032	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15682653	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15686710	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15689259	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15691504	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15698381	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15701440	Remapped	Perfect	NC_000005.10:g.(?_ 180947898)_(181003 789_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	180,947,898	181,003,789
nssv15612578	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15614120	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15616688	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15619776	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15626942	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15627142	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15627414	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15628068	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15628379	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15628639	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15632777	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15639363	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15640364	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15642104	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15646152	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15654908	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15656514	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15657010	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15661232	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15663619	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15664092	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15668801	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15669471	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15672333	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15675555	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15677032	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15682653	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15686710	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15689259	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15691504	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15698381	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789
nssv15701440	Submitted genomic		NC_000005.9:g.(?_1 80374898)_(1804307 89_?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	180,374,898	180,430,789

dbVar

Database of genomic structural variation

nsv4384072

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant