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dbVar

Database of genomic structural variation

nsv4385106

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:20,070

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 228 SVs from 60 studies. See in: genome view

Remapped(Score: Perfect):128,286,051-128,306,120

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4385106	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	128,286,051	128,306,120
nsv4385106	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	127,926,104	127,946,173

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15660811	copy number gain	4-0034-003	SNP array	Genotyping	30
nssv15660831	copy number gain	4-0034-004	SNP array	Genotyping	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15660811	Remapped	Perfect	NC_000007.14:g.(?_ 128286051)_(128306 120_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	128,286,051	128,306,120
nssv15660831	Remapped	Perfect	NC_000007.14:g.(?_ 128286051)_(128306 120_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	128,286,051	128,306,120
nssv15660811	Submitted genomic		NC_000007.13:g.(?_ 127926104)_(127946 173_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	127,926,104	127,946,173
nssv15660831	Submitted genomic		NC_000007.13:g.(?_ 127926104)_(127946 173_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	127,926,104	127,946,173

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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