nsv4387268

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:45
Validation:Not tested
Clinical Assertions: No
Region Size:31,035

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 956 SVs from 85 studies. See in: genome view

Remapped(Score: Perfect):11,068,228-11,099,262

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4387268	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nsv4387268	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000012.11	Chr12	11,220,827	11,251,861

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15612014	copy number loss	1-0642-003	SNP array	Genotyping	19
nssv15612337	copy number loss	1-0665-001	SNP array	Genotyping	24
nssv15621542	copy number loss	1-1004-003	SNP array	Genotyping	21
nssv15623415	copy number loss	1-0236-002	SNP array	Genotyping	23
nssv15624452	copy number loss	1-0298-003	SNP array	Genotyping	28
nssv15624920	copy number loss	1-0298-002	SNP array	Genotyping	24
nssv15627011	copy number loss	1-0458-005	SNP array	Genotyping	25
nssv15627827	copy number loss	1-0449-003	SNP array	Genotyping	12
nssv15629894	copy number loss	1-0595-003	SNP array	Genotyping	30
nssv15630564	copy number loss	1-0595-005	SNP array	Genotyping	21
nssv15630688	copy number loss	1-0600-004	SNP array	Genotyping	15
nssv15632032	copy number loss	10-0009-001	SNP array	Genotyping	24
nssv15632298	copy number loss	10-1104-002	SNP array	Genotyping	24
nssv15633568	copy number loss	11-0029-003	SNP array	Genotyping	20
nssv15635522	copy number loss	12-4453-004	SNP array	Genotyping	24
nssv15651048	copy number loss	2-1415-001	SNP array	Genotyping	22
nssv15656936	copy number loss	3-0666-000	SNP array	Genotyping	24
nssv15658316	copy number loss	4-0036-003	SNP array	Genotyping	18
nssv15660860	copy number loss	4-0052-003	SNP array	Genotyping	12
nssv15661537	copy number loss	4-0027-004	SNP array	Genotyping	23
nssv15663338	copy number loss	4-0064-001	SNP array	Genotyping	22
nssv15664131	copy number loss	6-0394-003	SNP array	Genotyping	18
nssv15668434	copy number loss	7-0205-003	SNP array	Genotyping	17
nssv15670859	copy number loss	7-0306-003	SNP array	Genotyping	25
nssv15675026	copy number loss	209351	SNP array	Genotyping	35
nssv15678066	copy number loss	242059S	SNP array	Genotyping	21
nssv15680458	copy number loss	193292	SNP array	Genotyping	16
nssv15682577	copy number loss	OCD115-S_1689	SNP array	Genotyping	28
nssv15684415	copy number loss	OCD114-S_1686	SNP array	Genotyping	18
nssv15685795	copy number loss	OCD179-SN-358-1760	SNP array	Genotyping	19
nssv15686430	copy number loss	OCD135-896463	SNP array	Genotyping	19
nssv15687960	copy number loss	192220	SNP array	Genotyping	15
nssv15689133	copy number loss	232818S	SNP array	Genotyping	23
nssv15692374	copy number loss	OCD6-S_896122	SNP array	Genotyping	17
nssv15692896	copy number loss	OCD77-896702	SNP array	Genotyping	23
nssv15692916	copy number loss	OCD77-896703	SNP array	Genotyping	27
nssv15693262	copy number loss	OCD9-S_896152	SNP array	Genotyping	16
nssv15693434	copy number loss	OCD7-S_896132	SNP array	Genotyping	24
nssv15695254	copy number loss	160095	SNP array	Genotyping	23
nssv15695294	copy number loss	159369	SNP array	Genotyping	23
nssv15695824	copy number loss	207951	SNP array	Genotyping	22
nssv15696904	copy number loss	144444	SNP array	Genotyping	20
nssv15698943	copy number loss	178829	SNP array	Genotyping	15
nssv15699797	copy number loss	80447	SNP array	Genotyping	25
nssv15702435	copy number loss	169112	SNP array	Genotyping	24

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15612014	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15612337	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15621542	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15623415	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15624452	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15624920	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15627011	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15627827	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15629894	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15630564	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15630688	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15632032	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15632298	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15633568	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15635522	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15651048	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15656936	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15658316	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15660860	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15661537	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15663338	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15664131	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15668434	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15670859	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15675026	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15678066	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15680458	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15682577	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15684415	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15685795	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15686430	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15687960	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15689133	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15692374	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15692896	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15692916	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15693262	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15693434	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15695254	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15695294	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15695824	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15696904	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15698943	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15699797	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15702435	Remapped	Perfect	NC_000012.12:g.(?_ 11068228)_(1109926 2_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,068,228	11,099,262
nssv15612014	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15612337	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15621542	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15623415	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15624452	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15624920	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15627011	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15627827	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15629894	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15630564	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15630688	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15632032	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15632298	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15633568	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15635522	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15651048	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15656936	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15658316	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15660860	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15661537	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15663338	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15664131	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15668434	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15670859	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15675026	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15678066	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15680458	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15682577	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15684415	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15685795	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15686430	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15687960	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15689133	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15692374	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15692896	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15692916	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15693262	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15693434	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15695254	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15695294	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15695824	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15696904	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15698943	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15699797	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861
nssv15702435	Submitted genomic		NC_000012.11:g.(?_ 11220827)_(1125186 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,220,827	11,251,861

dbVar

Database of genomic structural variation

nsv4387268

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant