nsv4445893
- Organism: Homo sapiens
- Study:nstd175 (Genome in a Bottle)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:SVTYPE=INS;REPTYPE=SIMPLEINS
- Publication(s):Genome in a Bottle
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 105 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 5 SVs from 5 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 35 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4445893 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 56,375,615 | 56,375,615 |
| nsv4445893 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NW_003871073.1 | Chr11|NW_0 03871073.1 | 186,365 | 186,365 |
| nsv4445893 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 56,143,091 | 56,143,091 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15755979 | insertion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15755979 | Remapped | Perfect | NW_003871073.1:g.1 86365_186366ins760 5 | GRCh38.p12 | Second Pass | NW_003871073.1 | Chr11|NW_0 03871073.1 | 186,365 | 186,365 |
| nssv15755979 | Remapped | Perfect | NC_000011.10:g.563 75615_56375616ins7 605 | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 56,375,615 | 56,375,615 |
| nssv15755979 | Submitted genomic | NC_000011.9:g.5614 3091_56143092ins76 05 | GRCh37 (hg19) | NC_000011.9 | Chr11 | 56,143,091 | 56,143,091 |